Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1483693 104 3e-17 >seq1483693 Length=927 Score = 104 bits (114), Expect = 3e-17 Identities = 280/420 (67%), Gaps = 20/420 (5%) Strand=Plus/Minus Query 164551 GGTAAAACATTAATGGCTCGATGCATTGCTCAAGCTTTTAAAT-CGCGACCCGTTAAAAT 164609 |||||||| ||||||||||| |||| || | |||||| || || |||||| Sbjct 703 GGTAAAACCTTAATGGCTCGTCAAATTGGAAAAA-TGTTAAATGCGAGAGATCCTAAAAT 645 Query 164610 TGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAA 164669 || |||||||| ||| | || | || |||||||| || || ||||| ||||| || Sbjct 644 CGTAAATGGTCCAGAAGTCTTAGATAAGTATGTAGGCGAATCTGAAGCAAATGTGAGGCG 585 Query 164670 GTTGTTTCAGGAGGCTGAAGAAGA--ACAAAAGAAAGCAGGTTT-AGCTAGTAAATTACA 164726 | | ||| || |||||||| || | ||| ||| | ||| | || | || || Sbjct 584 GCTTTTTGCAGAAGCTGAAGAGGAGGAGAAACGAATG--GGTCCGAACTCTGGACTT-CA 528 Query 164727 TGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGG---------TGATAA 164777 | || | || |||||||| |||||| |||| || | | || || || Sbjct 527 CATAATCATATTCGATGAGATCGATGCTATTTGTAAGCAGAGAGGCTCTGTAGCTGGAAA 468 Query 164778 TATT--ATTCAT-GATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATC 164834 | | | ||| ||| | || ||||| || || || || || || ||||| || || Sbjct 467 CACTGGAGTCAACGATACTGTAGTTAACCAATTACTATCAAAGATTGATGGAGTGGAGCA 408 Query 164835 CTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTT 164894 |||||||||||| | | | || ||||| ||| || ||| | || ||||| ||| | Sbjct 407 GTTAAATAATATTCTGGTCATTGGAATGACTAACAGAAAGGATATGATCGATGAAGCTCT 348 Query 164895 ATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACG 164954 | | |||||||| ||||||||| | || ||||||| | | || ||| || ||||||| Sbjct 347 ACTTCGACCTGGACGATTAGAAATTCAAGTAGAAATTAGTCTTCCAGACGAACAAGGACG 288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583481169489600