Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1603056 156 7e-34 seq764066 116 6e-22 seq1188050 111 2e-20 seq686772 111 2e-20 seq1395273 104 4e-18 >seq1603056 Length=1473 Score = 156 bits (172), Expect = 7e-34 Identities = 196/269 (73%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||||||| | | |||||| ||||||||||| || || || ||||| || || Sbjct 293 CGCTAAGCGTCATCGTAAAGTTCTTCGCGATAACATCCAGGGTATTACTAAGCCCGCCAT 234 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| ||||||||||||| || || || ||| |||| || ||| | || || |||| Sbjct 233 TCGTCGTTTGGCTCGTCGTGGAGGCGTGAAACGTATCTCCGGCTTGATATACGAGGAGAC 174 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | | || |||||| | ||| | ||| ||| ||| || || | || ||||| Sbjct 173 TAGAGGCGTATTGAAGGTATTCTTGGAGAACGTGATCAGAGACGCCGTAACGTACACCGA 114 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| || ||| | ||||| |||| || || ||||| | ||||| Sbjct 113 GCACGCGAAGAGGAAGACCGTGACCGCTATGGACGTCGTTTACGCCTTGAAGAGGCAAGG 54 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 |||| | || ||||| || |||||| Sbjct 53 ACGTACTCTGTACGGTTTCGGCGGTTAAT 25 >seq764066 Length=424 Score = 116 bits (128), Expect = 6e-22 Identities = 120/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||||||| | | |||||| ||||||||||| || ||||| ||||| || || Sbjct 403 CGCTAAGCGTCATCGTAAAGTTCTTCGCGATAACATCCAGGGCATCACTAAGCCCGCCAT 344 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| ||||||||||||| || || || ||| |||| || || | || || |||| Sbjct 343 TCGTCGTTTGGCTCGTCGTGGAGGCGTGAAACGTATCTCCGGGGTGATATACGAGGAGAC 284 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATC 16588 | | | || |||||| | ||| | ||| ||| ||| Sbjct 283 TGGAGGCGTGTTGAAGGTGTTCTTGGAGAACGTGATC 247 >seq1188050 Length=576 Score = 111 bits (122), Expect = 2e-20 Identities = 88/106 (83%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||||||| | | |||||| ||||||||||| |||||||| ||||| || || Sbjct 106 CGCTAAGCGTCATCGTAAAGTTCTTCGCGATAACATCCAGGGAATCACTAAGCCCGCCAT 47 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTG 16537 |||||| ||||||||||||| || || || ||| |||| || ||| Sbjct 46 TCGTCGTTTGGCTCGTCGTGGAGGCGTGAAACGTATCTCCGGGTTG 1 >seq686772 Length=408 Score = 111 bits (122), Expect = 2e-20 Identities = 160/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 16475 ATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGA 16534 ||||| ||||| || || |||||| ||||||||||||| || || || ||| |||| || Sbjct 408 ATCACTAAGCCCGCCATTCGTCGTTTGGCTCGTCGTGGAGGCGTGAAACGTATCTCCGGG 349 Query 16535 TTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGAT 16594 ||| | || || |||| | | | || |||||| | ||| | ||| ||| ||| || Sbjct 348 TTGATATACGAGGAGACTAGAGGCGTGTTGAAGGTGTTCTTGGAGAACGTGATCAGAGAC 289 Query 16595 GCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTAT 16654 || | || ||||||||||| || | ||||| || ||| | ||||| |||| || Sbjct 288 GCCGTAACGTACACCGAGCACGCGAAGAGGAAGACCGTGACCGCTATGGACGTCGTTTAC 229 Query 16655 GCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 || |||| | ||||| |||| | || ||||| || |||||| Sbjct 228 GCCCTGAAGAGGCAAGGACGTACTCTGTACGGTTTCGGCGGTTAAT 183 >seq1395273 Length=760 Score = 104 bits (114), Expect = 4e-18 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 16462 TAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAA 16521 ||||||||| || || || |||| || || ||||| ||||||||||||| || | || Sbjct 541 TAACATCCAGGGTATTACGGAGCCCGCCATTAGTCGTTTGGCTCGTCGTGGAGGCATGAA 600 Query 16522 GCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGAC 16581 ||| |||| || ||| | || || |||| | | | || |||||| | ||| | ||| Sbjct 601 ACGTATCTCCGGCTTGATATACGAGGAGACTAGAGGCGTATTGAAGGTATTCTTGGAGAA 660 Query 16582 CGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCAT 16641 | | ||| | || || | || ||||||||||| || | ||||| || ||| | || Sbjct 661 CATGATCAAAGACGCCGTAACTTACACCGAGCACGCAAAGAGGAAGACCGTGACCGCTAT 720 Query 16642 GGATATCGTCTATGCATTGAAACGTCAAGGCCGTA 16676 ||| |||| || || ||||| | ||||| |||| Sbjct 721 GGACGTCGTTTACGCCTTGAAGAGGCAAGGACGTA 755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 77554199104308