Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_006657.1 Length=19820 Score E Sequences producing significant alignments: (Bits) Value seq1622426 91.5 2e-14 seq1648088 86.0 8e-13 seq1650932 84.2 3e-12 seq1410675 84.2 3e-12 seq1640447 82.4 9e-12 seq1638174 82.4 9e-12 seq1547810 82.4 9e-12 >seq1622426 Length=1689 Score = 91.5 bits (100), Expect = 2e-14 Identities = 102/134 (76%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 12839 AGGATAAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGttttttttCAAGCAAC 12898 || |||| |||| | | |||||||||||| || |||||||||| || | |||| | || Sbjct 1043 AGTATAATTTCATAAACGTGATGCCTGCAGGGTAAATACAATAATTCTCTTTCTAACATT 1102 Query 12899 CGTTCCAGTGAAACTGC-AGCTCCTTTACTTGATCCTAGATTTGCAGCAGTAGTATCACA 12957 |||||||| ||| ||| ||| |||||| | || | ||| | |||||| ||||| || Sbjct 1103 TGTTCCAGT-AAATTGCAAGCACCTTTAACTCTACCAAAATTGGAAGCAGTTGTATCGCA 1161 Query 12958 GCATAGAGCTTTAA 12971 ||||| ||||||| Sbjct 1162 ACATAGCGCTTTAA 1175 >seq1648088 Length=2310 Score = 86.0 bits (94), Expect = 8e-13 Identities = 156/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 12749 TCAATTTC-GCCCCAGCTCTCTCGAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGT 12807 |||||| | | || ||| || | ||||||||||||| | |||||| ||||||| || Sbjct 1712 TCAATTCCAGACCAAGCACTTT-GAAATCTTTTAAAAATTAATACATCCGGACCTGTAGT 1654 Query 12808 TGTAGGTATTTTAAGTTCAAAAACACCCCTGAGGATAAGTTCAAATATGTGATGCCTGCA 12867 |||| ||||| || ||||||| || || || | |||| |||| ||||| || || Sbjct 1653 TGTACCCATTTTTTCCTCGAAAACACTTCTAAGAATGATTTCATATATATGATGTCTACA 1594 Query 12868 AGGCAAATACAATAGttttttttCAAGCAACCGTTCCAGTGAAACTGCA-GCTCCTTTAC 12926 ||||| |||| || | | | || | || |||| | | | |||| ||||||||| Sbjct 1593 AGGCAGGCACAAAAGGTCTCTATCTAAAAATTGTTCTA-TCAGCATGCAGGCTCCTTTAA 1535 Query 12927 TTGATCCTAGATTTGCAGCAGTAGTATCACAGCATAGAGCTTT 12969 ||| | |||||| || ||||||||| || | || | ||| Sbjct 1534 CACCTCCAATATTTGCTGCTGTAGTATCAAAGTAAAGTGTTTT 1492 >seq1650932 Length=2454 Score = 84.2 bits (92), Expect = 3e-12 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 12771 GAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGTTGTAGGTATTTTAAGTTCAAAAA 12830 ||||||||||||| | |||||| ||||||| |||||| || || || |||| Sbjct 1603 GAAATCTTTTAAAAAGTAATACATCCGGACCTGTAGTTGTACCCATCTTTTCCTCGAAAA 1544 Query 12831 CACCCCTGAGGATAAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGtttttttt 12890 ||| || || || | |||| |||| ||||| || ||||||| ||||| || | | | | Sbjct 1543 CACTTCTAAGAATGATTTCATATATATGATGTCTACAAGGCAGGTACAAAAGGTCTCTAT 1484 Query 12891 CAAGCAACCGTTCCAGTGAAACTGCA-GCTCCTTTACTTGATCCTAGATTTGCAGCAGTA 12949 | | || |||| | | | |||| ||||||||| | ||| |||||| || ||| Sbjct 1483 CTAAAAATTGTTCTA-TCAGCATGCAGGCTCCTTTAATACCTCCAGTATTTGCTGCTGTA 1425 Query 12950 GTATCACAGCATAGAGCTTT 12969 ||||| |||| | ||||| Sbjct 1424 GTATCGAAGCAAACTGCTTT 1405 >seq1410675 Length=783 Score = 84.2 bits (92), Expect = 3e-12 Identities = 192/280 (69%), Gaps = 12/280 (4%) Strand=Plus/Plus Query 12749 TCAATTTCGCCCCA-GCTCTCTCGAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGT 12807 ||||||| ||||| | || || |||| | |||||| || || || ||||| || || Sbjct 302 TCAATTTTACCCCATGATCGCTTGAAA-CATTTAAACAAGGGAACGTCAGGCCCACTGGA 360 Query 12808 TGTAGGTATTTTAAGTT--CAAAAACACCCCTGAGGATAAGTTCAAATATGTGATGCCTG 12865 || || || || || |||| || | | ||||||||| | |||||||||||| Sbjct 361 GGTCGGCATC--AACTTATCAAATTCATTTTTCAATATAAGTTCATAAATGTGATGCCTG 418 Query 12866 CAAGGCAAATACAATAGttttttttCAAGCAACCGTTCCAGTGAAACTGC-AGCTCCTTT 12924 || || |||||||||| | |||||| | || |||||||| ||| ||| ||| || || Sbjct 419 CAGGGTAAATACAATAAGTCTTTTTCTAACATTTGTTCCAGT-AAATTGCAAGCACCATT 477 Query 12925 ACTTGATCCTAGATTTGCAGCAGTAGTATCACAGCATAGAGCTTTAATAAAGTCTGGAAT 12984 | || | ||| | ||| || |||| || |||| ||||||| |||| || Sbjct 478 AACCCTACCAAAATTGGAAGCTGTTATATCGCAATATAGCGCTTTAACCTTATCTGCCAT 537 Query 12985 TCCCCAATCATTAATAG--CGTCAAACATTGCATCAGCTT 13022 ||||||| |||||| | || || | ||||| |||| Sbjct 538 ATCCCAATC--TAATAGAACTTCGAAAACTGCATGTGCTT 575 >seq1640447 Length=2044 Score = 82.4 bits (90), Expect = 9e-12 Identities = 155/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 12749 TCAATTTC-GCCCCAGCTCTCTCGAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGT 12807 |||||| | | || ||| || | ||||||||||||| | |||||| ||||||| | Sbjct 1449 TCAATTCCAGACCAAGCACTAT-GAAATCTTTTAAAAAGTAATACATCCGGACCTGCAAT 1391 Query 12808 TGTAGGTATTTTAAGTTCAAAAACACCCCTGAGGATAAGTTCAAATATGTGATGCCTGCA 12867 |||| || || || ||||||| || || || | |||| |||| ||||| ||||| Sbjct 1390 TGTACCCATCTTTTCCTCGAAAACACTTCTAAGAATGATTTCATATATATGATGTCTGCA 1331 Query 12868 AGGCAAATACAATAGttttttttCAAGCAACCGTTCCAGTGAAACTGCA-GCTCCTTTAC 12926 | ||| ||||| || | | | || | || ||| | | | |||| ||||||||| Sbjct 1330 AAGCAGGTACAAAAGGTCTCTATCTAAAAATTATTCTATCGGCA-TGCAGGCTCCTTTAA 1272 Query 12927 TTGATCCTAGATTTGCAGCAGTAGTATCACAGCATAGAGCTTT 12969 ||| | |||||| || |||||||| |||| || ||||| Sbjct 1271 CACCTCCAATATTTGCTGCTGTAGTATCGAAGCAAAGTGCTTT 1229 >seq1638174 Length=1985 Score = 82.4 bits (90), Expect = 9e-12 Identities = 155/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 12749 TCAATTTC-GCCCCAGCTCTCTCGAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGT 12807 |||||| | | || ||| || | ||||||||||||| | |||||| ||||||| || Sbjct 767 TCAATTCCAGACCAAGCACTTT-GAAATCTTTTAAAAAGTAATACATCCGGACCTGTAGT 825 Query 12808 TGTAGGTATTTTAAGTTCAAAAACACCCCTGAGGATAAGTTCAAATATGTGATGCCTGCA 12867 |||| || || | ||||||| || || || | |||| |||| ||||| || || Sbjct 826 TGTACCCATCTTTTCCCCGAAAACACTTCTAAGAATGATTTCATATATATGATGTCTACA 885 Query 12868 AGGCAAATACAATAGttttttttCAAGCAACCGTTCCAGTGAAACTGCA-GCTCCTTTAC 12926 ||||| ||||| || | | |||| | || ||| | | | |||| ||||||||| Sbjct 886 AGGCAGGTACAAAAGGTCTCTTTCTAAAAATAGTTTTA-TCAGCATGCAGGCTCCTTTAA 944 Query 12927 TTGATCCTAGATTTGCAGCAGTAGTATCACAGCATAGAGCTTT 12969 ||| |||||| || |||||||| |||| || ||||| Sbjct 945 CACCTCCAGTATTTGCTGCTGTAGTATCGAAGCAAAGTGCTTT 987 >seq1547810 Length=1143 Score = 82.4 bits (90), Expect = 9e-12 Identities = 154/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 12749 TCAATTTC-GCCCCAGCTCTCTCGAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGT 12807 |||||| | | || ||| || | ||||||||||||| | |||||| ||||||| || Sbjct 15 TCAATTCCAGACCAAGCACTTT-GAAATCTTTTAAAAAGTAATACATCCGGACCTGTAGT 73 Query 12808 TGTAGGTATTTTAAGTTCAAAAACACCCCTGAGGATAAGTTCAAATATGTGATGCCTGCA 12867 | || || || || ||||||| || || || | |||| |||| ||||| || | Sbjct 74 TATACCCATCTTTTCCTCGAAAACACTTCTAAGAATGATTTCACATATATGATGTCTATA 133 Query 12868 AGGCAAATACAATAGttttttttCAAGCAACCGTTCCAGTGAAACTGCA-GCTCCTTTAC 12926 |||| ||||| || ||||| || | || |||| | | | |||| ||||||||| Sbjct 134 TGGCAGGTACAAAAGGTTTTTATCTAAAAATTGTTCTA-TCAGCATGCAGGCTCCTTTAA 192 Query 12927 TTGATCCTAGATTTGCAGCAGTAGTATCACAGCATAGAGCT 12967 ||| |||||| || ||||||||| |||| || ||| Sbjct 193 CACCTCCAGTATTTGCTGCTGTAGTATCAAAGCAAAGTGCT 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 62087925251124