Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1644865 185 9e-42 >seq1644865 Length=2180 Score = 185 bits (204), Expect = 9e-42 Identities = 478/728 (66%), Gaps = 12/728 (2%) Strand=Plus/Minus Query 21184 TTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGA 21243 ||||||||| |||| ||||| || || || ||||| || || ||||| | || ||| Sbjct 782 TTTTTGATATTCACCTACTCTCTTCTCAAAGAAATTAGTTTTCCCTTCGAGGGAAATATT 723 Query 21244 TTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAA 21303 ||||| || || || ||||||||| |||| | || | ||| |||| ||| ||| Sbjct 722 CTCCATGAAGTCTAAAGGATTTTCAACTTTATAGTGCTTTTCACATCCCAACTCTATTAA 663 Query 21304 TAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAA 21363 | |||||| || |||||||| || || || ||||||| ||||||||| || || | Sbjct 662 AAGTCTATCGGCGACAAATTCAATGTACTGTTTCATTAATGTACAATTCATTCCAATTAG 603 Query 21364 TTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTAT 21423 || || | || | ||| || || || ||| || || ||||| || |||||| Sbjct 602 AGCAACGGGCAATGCATCTGTTAAGAATTCTTGTTCAATTGAAACGGCGTCTGTAATTAT 543 Query 21424 ATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAA 21483 | | | | ||||||| || | | || |||||||| || || || || Sbjct 542 TTCCGTGACAGTTTCCTTACTAGGTTTATTAACCAGATGCTTAAACATTAAGCACGCGAA 483 Query 21484 ATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCAT 21543 ||| ||| | ||||||||||||| ||| | ||| ||| ||| || | || ||||| Sbjct 482 ATCGGTATGAAGACCTTCATCCCTAGATATAAGTTCGTTACTAAAAGTAAGTCCTGGCAT 423 Query 21544 TAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTC--CTGAAAAGAAAATGCCC 21601 | ||||||||| || | |||||| || | ||||| | || |||||| || || || Sbjct 422 CAGTCCTCTCTTCTTGAGCCAAAAAATAGCAGCAAAAGATCCACTGAAA--AATATCCCT 365 Query 21602 TCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTAT--CCAATATCC 21659 ||||| | ||||| ||||| | || ||| |||| | || ||||| || ||| |||| Sbjct 364 TCAACAGAGGCAAACGCAACAACTCTTTCGGCGTAAGAAGCTTCTTCATTGCCA--ATCC 307 Query 21660 ATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAA 21719 | | ||||| | || || | ||| | ||| | || || || || || || | Sbjct 306 AACATAAAGCCCAGTCGGCTTTCTTTTTGACACATGGGAGAGTTTCGATGGCGTTAAAGA 247 Query 21720 GATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAG 21779 | | ||||||| | ||| | ||| ||||||||||||| Sbjct 246 GTTTCGTTTTTTCTTTAGGATCAGATATATAGGTATCGATCAGTAAACTATACATTTCAC 187 Query 21780 AATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAA 21839 || | ||||| ||| ||||| || |||||||| | ||||| || | | ||||| Sbjct 186 TGTGAACGTTTTCGATCATAATCTGGAAACCGTAAAAGAACCTTGCTTCAGGAACTTGAA 127 Query 21840 CCTC--GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAA 21897 ||| || | || || | ||||||| || || || |||||||| || ||||| Sbjct 126 TCTCTTGGCAGAACCTC--TCCACCAAGTTCTCGTTGACAATTCCATCCGATGCAGCAAA 69 Query 21898 AAATGCCA 21905 ||||||| Sbjct 68 GAATGCCA 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520840215409440