Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1644865 150 5e-31 >seq1644865 Length=2180 Score = 150 bits (166), Expect = 5e-31 Identities = 319/473 (67%), Gaps = 5/473 (1%) Strand=Plus/Plus Query 22479 TTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGC 22538 ||| | ||| ||| | || |||| ||||| |||||||| || || || |||| | Sbjct 326 TTCTTACGCCGAAAGAGTTGTTGCGTTTGCCTCTGTTGAAGGGATATTTTTCAGTGGATC 385 Query 22539 ATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAA 22598 ||| ||| || |||||||| || || | | | | ||||| || || || ||| || Sbjct 386 TTTTGCTGCTATTTTTTGGCTCAAGAAGAGAGGACTGATGCCAGGACTTACTTTTAGTAA 445 Query 22599 TGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAA 22658 || | || | ||||| ||||||||||||||||| ||||| | | | | || Sbjct 446 CGAACTTATATCTAGGGATGAAGGTCTTCATACCGATTTCGCGTGCTTAATGTTT---AA 502 Query 22659 TCATATCATTCATAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGA 22718 ||| | || |||||| | | |||||||| || || |||||| | || ||| Sbjct 503 GCATCTGGTTAATAAACCTAGTAAGGAAACTGTCACGGAAATAATTACAGACGCCGTTTC 562 Query 22719 ACTTGAACGTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGA 22778 | |||||| ||| | || || || || || ||| ||||| || ||| Sbjct 563 AATTGAACAAGAATTCTTAACAGATGCATTGCCCGTTGCTCTAATTGGAATGAATTGTAC 622 Query 22779 ATCAATGAGTACA-TATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATG 22837 || ||||| ||| || ||| ||||||| || ||| | || ||||| | || | || Sbjct 623 ATTAATGA-AACAGTACATTGAATTTGTCGCCGATAGACTTTTAATAGAGTTGGGATGTG 681 Query 22838 CAAAGCATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAA 22897 |||||| ||||| || | ||||| || || | ||||| |||||| || ||||| | Sbjct 682 AAAAGCACTATAAAGTTGAAAATCCTTTAGACTTCATGGAGAATATTTCCCTCGAAGGGA 741 Query 22898 AGACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATG 22950 | || |||||||| || || ||||| |||||||| |||||| ||||||||| Sbjct 742 AAACTAATTTCTTTGAGAAGAGAGTAGGTGAATATCAAAAATGTGGTGTTATG 794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1275573515700792