Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq678478 131 1e-25 seq1488354 123 2e-23 seq1135619 111 1e-19 seq663341 104 2e-17 seq770237 100 2e-16 seq1605470 89.7 4e-13 seq509544 89.7 4e-13 seq242576 84.2 2e-11 >seq678478 Length=406 Score = 131 bits (144), Expect = 1e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 23993 GCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGA 24052 |||| | || || ||||| | || |||||| | || ||| ||||||| || || || Sbjct 1 GCAAATTTTCGTCAAAACCCTTACAGGAAAAACAATCACCCTCGAAGTTGAAGCTTCAGA 60 Query 24053 CACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACA 24112 ||| || ||| | || ||| || || |||||||||||||| || ||||||||||| Sbjct 61 CACAATTGAGAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCACCCGATCAACA 120 Query 24113 GAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACAT 24172 |||| |||||| | || |||||||| ||||||| | | | || || || ||||| Sbjct 121 GAGATTGATTTTTGCTGGAAAGCAACTAGAAGATGGTCGTACATTGAGTGACTACAACAT 180 Query 24173 TCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| || ||| | |||||||| | | ||||||||||| Sbjct 181 CCAAAAAGAGTCCACACTCCATTTAGTTCTGCGGTTGAGAGGAGG 225 >seq1488354 Length=939 Score = 123 bits (136), Expect = 2e-23 Identities = 169/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| ||||| ||||||| ||| | ||||| | ||||| || | Sbjct 367 AATGCAAATTTTTGTGAAAACTCTAACTGGTAAAACTATTACTTTGGAAGTAGAACCTTC 308 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| || | |||||| ||| ||| || ||||| || || || || || || Sbjct 307 TGACACCATAGAAAATGTCAAAGCAAAAATTCAGGATAAAGAGGGTATTCCACCAGACCA 248 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| || || || | | || || ||| | ||||||| |||| | || || || || Sbjct 247 ACAAAGGCTTATATTTGCTGGAAAACAATTGGAAGATGGAAGAACATTGAGTGACTACAA 188 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAAT 24225 ||||||||||||||||| ||||||||||||| || | || ||||| | |||| Sbjct 187 TATTCAAAAAGAATCTACCCTTCATTTAGTGTTGAGGCTCAGGGGAGGGTTTTAAT 132 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| ||||||||||| | || || | ||||| || | Sbjct 822 ATGCAGATCTTTGTCAAAACTTTAACTGGAAAGACCATAACTTTGGAAGTAGAATCTTCA 763 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || || ||| ||| || |||||||| || || || || ||| Sbjct 762 GACACTATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCGGACCAA 703 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || || || | | || || || | ||||||| |||| | || ||||| || Sbjct 702 CAAAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGAGAACATTAAGTGATTACAAT 643 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||||| || || |||||| | ||| | || | ||||| ||||||||| Sbjct 642 ATTCAGAAGGAGTCTACATTACATCTTGTTCTTAGATTAAGAGGAGGA 595 >seq1135619 Length=547 Score = 111 bits (122), Expect = 1e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 |||||||||||||| || |||||||| |||||| |||||| | || |||||||| ||| Sbjct 8 GACAAAGAAGGCATTCCACCCGATCAGCAGAGATTGATTTTTGCTGGAAAGCAACTTGAA 67 Query 24144 GATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||| | | | |||||||| ||||| ||||| |||||||| | || || || | Sbjct 68 GATGGTCGCACACTTAGCGATTACAACATCCAAAAGGAATCTACGCTCCACTTGGTACTT 127 Query 24204 AGATTGAGAGGAGG 24217 |||||||||||||| Sbjct 128 AGATTGAGAGGAGG 141 Score = 104 bits (114), Expect = 2e-17 Identities = 165/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| ||||||||||| | || || | ||||| || | Sbjct 143 ATGCAAATATTTGTCAAAACCTTAACTGGAAAGACCATCACTCTTGAAGTTGAACCTTCA 202 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | || || || || || |||||||| || || || || || Sbjct 203 GATACAATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGAATCCCACCAGACCAG 262 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||||| | || |||||||| ||||||| | | | || || || ||| Sbjct 263 CAGAGATTGATTTTTGCTGGAAAGCAACTTGAAGATGGTCGCACACTGAGTGACTACAAC 322 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAATGA 24227 || ||||| || || || |||||||||| || || ||||||||||| |||||| Sbjct 323 ATCCAAAAGGAGTCCACTCTTCATTTAGTATTGAGGCTGAGAGGAGGAAATTAATGA 379 >seq663341 Length=403 Score = 104 bits (114), Expect = 2e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || ||| || || |||||||||||||| || |||||||| Sbjct 11 GACACTATCGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCACCCGATCAG 70 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| | |||| | || |||||||| ||||||| | | | || || || ||| Sbjct 71 CAGAGATTAATTTTTGCTGGAAAGCAACTAGAAGATGGTCGTACATTGAGTGACTACAAC 130 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||| ||| | |||||||| | | ||||||||||| Sbjct 131 ATCCAAAAAGAATCCACACTCCATTTAGTTCTGCGGTTGAGAGGAGG 177 >seq770237 Length=425 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 |||||||| | ||||| ||||| || ||||| || | || || | ||||| ||| | Sbjct 51 AAAATGCAGATCTTTGTGAAAACTTTGACTGGGAAGACCATAACACTAGAAGTTGAGCCT 110 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 || || || || | ||||| ||||||| || |||||||| || || || || Sbjct 111 TCAGATACAATTGAAAATGTCAAGGCAAAGATTCAAGATAAAGAAGGTATCCCACCAGAC 170 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || || || |||||| | || || || || || |||| | | |||| || || Sbjct 171 CAGCAAAGGTTGATTTTTGCAGGAAAACAGCTTGAGGATGGGCGTACTCTCAGTGACTAC 230 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || ||||||||||| || | ||||||||||| || |||||||| || Sbjct 231 AATATCCAAAAAGAATCCACTCTGCATTTAGTGTTGAGGTTGAGAGGGGG 280 >seq1605470 Length=1495 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 || |||||||| || || || || || |||||| |||||| | || |||||||| ||| Sbjct 21 GATAAAGAAGGAATCCCACCAGACCAGCAGAGATTGATTTTTGCTGGAAAGCAACTTGAA 80 Query 24144 GATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||| | | | || || || ||||| ||||| || || || |||||||||| || Sbjct 81 GATGGTCGCACACTGAGTGACTACAACATCCAAAAGGAGTCCACTCTTCATTTAGTATTG 140 Query 24204 AGATTGAGAGGAGGACTATAATGA 24227 || ||||||||||| |||||| Sbjct 141 AGGCTGAGAGGAGGAAATTAATGA 164 >seq509544 Length=375 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 131992 ATTGAGCGATTGACTCTGATCGATGTAAGGTCCCCTGTCTGCGGCCATATTCAACAATAC 132051 ||||||||| ||||||||||| ||| ||| ||| ||||| || ||||| | ||| | ||| Sbjct 215 ATTGAGCGACTGACTCTGATCTATGAAAGCTCCTCTGTCGGCAGCCATCTCCAAAACTAC 156 Query 132052 TTTCTGCTTAATTTCCCAAGCGGTCTTGAAGAGCGCCTTGACGTCGTGTGGAATGTCATC 132111 || || ||| ||||| | |||||| | | | ||| | | || ||||| | || Sbjct 155 CTTTTGGGGAATCTCCCACACTGTCTTGTATAACTTCTTCAAATTGTCGGGAATTTGTTC 96 Query 132112 GATATTCTGTACAGATCCGTTGTT 132135 ||||| || ||||||||||||| Sbjct 95 TATATTTTGCCCAGATCCGTTGTT 72 >seq242576 Length=334 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 || |||||||| || || || |||||||| || || || | | || || ||||| ||| Sbjct 318 GATAAAGAAGGTATCCCACCAGATCAACAAAGGCTTATATTTGCTGGTAAACAACTTGAA 259 Query 24144 GATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||| |||| | ||||||||||| || ||||||||||| || ||||| | || | Sbjct 258 GATGGTAGAACATTGAGCGATTATAATATACAAAAAGAATCCACGCTTCATCTTGTTCTT 199 Query 24204 AGATTGAGAGGAGG 24217 | ||||| ||||| Sbjct 198 CGGTTGAGGGGAGG 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421219224411180