Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq678478 95.1 1e-14 seq1656961 93.3 4e-14 seq1135619 93.3 4e-14 seq1605470 91.5 1e-13 seq663341 89.7 5e-13 seq252373 89.7 5e-13 >seq678478 Length=406 Score = 95.1 bits (104), Expect = 1e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | ||| ||||| |||||||| | || ||||| ||||| |||||||| || ||| Sbjct 225 CCTCCTCTCAACCGCAGAACTAAATGGAGTGTGGACTCTTTTTGGATGTTGTAGTCACTC 166 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || ||||| ||||| || || | || || | ||| || || || || Sbjct 165 AATGTACGACCATCTTCTAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCGGGTGGA 106 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| |||||| || | | ||| | || || | | || | Sbjct 105 ATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTCTCAATTGTGTCTGAAGCTTCAACT 46 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGC 131232 |||| ||| | ||||| || || || ||||| |||||||| ||| Sbjct 45 TCGAGGGTGATTGTTTTTCCTGTAAGGGTTTTGACGAAAATTTGC 1 >seq1656961 Length=2936 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/205 (71%), Gaps = 3/205 (1%) Strand=Plus/Plus Query 131045 CCTTT-TGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAG 131103 ||||| || ||||||||||| | ||| ||| || || || || || |||||| || Sbjct 2617 CCTTTCTGGATGTTGTAATCAGAGAGGGTTCGCCCATCTTCAAGTTGTTTTCCTGCGAAG 2676 Query 131104 ATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTG 131162 ||||| | || ||||| |||||||||||||| || || ||| ||| || || | | Sbjct 2677 ATTAATCTTTGTTGGTCAGGAGGGATTCCTTCCTTATC-TTGAATTTTGGCTTTTACATT 2735 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | |||||| | | ||| | || | |||| ||||||||| |||| ||||| || Sbjct 2736 TTCAATAGTATCTGAAGCCTCAACTTCAAGAGTAATGGTTTTACCAGTTAACGTTTTAAC 2795 Query 131223 GAAAATCTGCATGACTTATTTTATT 131247 || |||||||| |||||||| Sbjct 2796 AAAGATCTGCATCTGAAATTTTATT 2820 >seq1135619 Length=547 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 |||||||| | || ||||||||||| |||||||| || |||| ||||| || || Sbjct 351 ACTAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCACTCAGTGTGCGACCATCTTCA 292 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 || ||||| || || | || || | ||||||||| || |||||||||||||| || | Sbjct 291 AGTTGCTTTCCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATTCCTTCTTTATCTTGG 232 Query 131146 ATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTA 131205 ||||| ||| | | || | ||||| | | || | || | || | ||| || Sbjct 231 ATTTTAGCCTTAACATTTTCAATTGTATCTGAAGGTTCAACTTCAAGAGTGATGGTCTTT 172 Query 131206 CCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || |||| ||||| || || || ||||| Sbjct 171 CCAGTTAAGGTTTTGACAAATATTTGCAT 143 >seq1605470 Length=1495 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 |||||||| | || ||||||||||| |||||||| || |||| ||||| || || Sbjct 136 ACTAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCACTCAGTGTGCGACCATCTTCA 77 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 || ||||| || || | || || | ||||||||| || |||||||||||||| || | Sbjct 76 AGTTGCTTTCCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATTCCTTCTTTATCTTGG 17 Query 131146 ATTTT 131150 ||||| Sbjct 16 ATTTT 12 >seq663341 Length=403 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | ||| ||||| |||||||| | || || || ||||| |||||||| || || Sbjct 178 GCCTCCTCTCAACCGCAGAACTAAATGGAGTGTGGATTCTTTTTGGATGTTGTAGTCACT 119 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || || ||||| ||||| || || | ||||| | |||||| || || || Sbjct 118 CAATGTACGACCATCTTCTAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGATCGGGTGG 59 Query 131127 GATTCCTTCTTTGTCGGTGATTTT 131150 || ||||||||||| |||||| Sbjct 58 AATGCCTTCTTTGTCTTGGATTTT 35 >seq252373 Length=335 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || |||||||||| || |||| || ||||| ||||||||| || || ||| || Sbjct 44 AGTACTAAATGTAAAGTACACTCTTTCTGAATATTGTAATCGGACAGTGTTCGCCCATCT 103 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || | ||| ||||| || |||| || ||||| ||||| || || ||||||||||| || Sbjct 104 TCCAACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATTCCTTCTTTATCT 163 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 ||||| ||| | | || | ||||| | | ||| | || | || | || Sbjct 164 TGAATTTTAGCCTTTACATTTTCAATGGTATCACTTGCCTCAACCTCTAGAGTTATAGTC 223 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || || || | ||| || |||||||| ||||||| Sbjct 224 TTCCCAGTCAAAGTCTTAACGAAAATTTGCATGA 257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462197553431040