Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1644865 289 3e-73 seq1313256 102 9e-17 >seq1644865 Length=2180 Score = 289 bits (320), Expect = 3e-73 Identities = 542/796 (68%), Gaps = 8/796 (1%) Strand=Plus/Minus Query 92789 TCATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTT 92848 ||||||||||||||||||| ||||| || ||| | || ||||||||||| || || |||| Sbjct 795 TCATAACACCACATTTTTGATATTCACCTACTCTCTTCTCAAAGAAATTAGTTTTCCCTT 736 Query 92849 CCAAAGATATCGAATTCACTAGTGATT-----GGATTCTTGGCGTTATAATACTTTTCAC 92903 | | || || |||| | | | | ||||| | | ||||| | |||||||| Sbjct 735 CGAGGGAAAT---ATTCTCCATGAAGTCTAAAGGATTTTCAACTTTATAGTGCTTTTCAC 679 Query 92904 CGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963 |||||| || | |||||| || |||||||| |||||||| ||| || || Sbjct 678 ATCCCAACTCTATTAAAAGTCTATCGGCGACAAATTCAATGTACTGTTTCATTAATGTAC 619 Query 92964 AATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAA 93023 |||||||||| | ||| || || | || || || ||||| |||| || ||| || Sbjct 618 AATTCATTCCAATTAGAGCAACGGGCAATGCATCTGTTAAGAATTCTTGTTCAATTGAAA 559 Query 93024 CGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGT 93083 |||| ||| | | ||||| | || | || ||||| | || | || || Sbjct 558 CGGCGTCTGTAATTATTTCCGTGACAGTTTCCTTACTAGGTTTATTAACCAGATGCTTAA 499 Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGA 93143 ||||||||||||| || |||||||| | |||||| || | ||||| | || || || | Sbjct 498 ACATTAAGCACGCGAAATCGGTATGAAGACCTTCATCCCTAGATATAAGTTCGTTACTAA 439 Query 93144 ATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAG 93203 | || | ||||| | |||||||| |||||||||||||| || | ||||||| ||| Sbjct 438 AAGTAAGTCCTGGCATCAGTCCTCTCTTCTTGAGCCAAAAAATAGCAGCAAAAGATCCAC 379 Query 93204 aaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT 93263 |||||||| ||||| || | ||||| || |||| | |||||| || || | Sbjct 378 TGAAAAATATCCCTTCAACAGAGGCAAACGCAACAACTCTTTCGGCGTAAGAAGCTTCTT 319 Query 93264 TACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGA 93323 | ||| ||||| ||||||||| |||||||| || || | ||| || || ||||||| Sbjct 318 CATTGCCAATCCAACATAAAGCCCAGTCGGCTTTCTTTTTGACACATGGGAGAGTTTCGA 259 Query 93324 TAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAG 93383 | |||||||| || | | || | | ||| ||| || |||||||| | | | Sbjct 258 TGGCGTTAAAGAGTTTCGTTTTTTCTTTAGGATCAGATATATAGGTATCGATCAGTAAAC 199 Query 93384 AATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTT 93443 |||||||||| || || || || || ||| ||||| ||||| || | || |||| Sbjct 198 TATACATTTCACTGTGAACGTTTTCGATCATAATCTGGAAACCGTAAAAGAACCTTGCTT 139 Query 93444 CCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGG 93503 | | | || | ||||| | || ||||| || | || || ||||| || ||||| | Sbjct 138 CAGGAACTTGAATCTCTTGGCAGAACCTCTCCACCAAGTTCTCGTTGACAATTCCATCCG 79 Query 93504 ATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTAT 93563 |||| ||||| || |||| | ||| || ||||| ||||| | ||| || | Sbjct 78 ATGCAGCAAAGAATGCCAGAACATGGGAGATGAAATGACGTTCATCTGGCTGAAGTTTGT 19 Query 93564 CCCAATCGGATAGATC 93579 |||||| | ||||| Sbjct 18 TCCAATCAGCCAGATC 3 >seq1313256 Length=666 Score = 102 bits (112), Expect = 9e-17 Identities = 80/94 (85%), Gaps = 4/94 (4%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGT--TCCCTCGGGAGCG 126323 ||||||||||||||||||||||||||| |||||||||| |||| | || | | ||| Sbjct 335 GTCAGGTTGGCCGAGTGGTCTAAGGCGTCAGATTTAAGCTCTGATACTCGTATGAGTGCG 394 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||||||||||||||||||| ||| ||||| Sbjct 395 TGGGTTCGAACCCCACACCTGAC--ATTTTTATT 426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545281185937440