Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1488354 163 2e-35 seq252373 125 6e-24 seq678478 123 2e-23 seq1656961 122 7e-23 seq770237 120 2e-22 seq1135619 104 2e-17 seq242576 98.7 8e-16 seq123891 98.7 8e-16 seq663341 96.9 3e-15 >seq1488354 Length=939 Score = 163 bits (180), Expect = 2e-35 Identities = 187/250 (75%), Gaps = 1/250 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| |||||| |||| |||||||| | ||| | ||||| ||| | | Sbjct 366 ATGCAAATTTTTGTGAAAACTCTAACTGGTAAAACTATTACTTTGGAAGTAGAACCTTCT 307 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || ||||| ||||||||| || || |||||||||||||| || ||| Sbjct 306 GACACCATAGAAAATGTCAAAGCAAAAATTCAGGATAAAGAGGGTATTCCACCAGACCAA 247 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | ||||||||||| || ||||| || || ||| | || | || ||||| Sbjct 246 CAAAGGCTTATATTTGCTGGAAAACAATTGGAAGATGGAAGAACATTGAGTGACTACAAT 187 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTTCCAT-TTTA 22457 |||||||||||||| ||| | |||||||| ||| | | | ||||| ||| || |||| Sbjct 186 ATTCAAAAAGAATCTACCCTTCATTTAGTGTTGAGGCTCAGGGGAGGGTTTTAATATTTA 127 Query 22458 AAATTATATT 22467 ||||| || Sbjct 126 TCATTATTTT 117 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || ||||| || ||||| |||| | ||||| || | | Sbjct 594 ATGCAAATTTTTGTGAAGACCTTAACGGGAAAAACTATCACCTTGGAAGTAGAGCCTTCA 535 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||||||| || || |||||||||||||| || ||| Sbjct 534 GACACAATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAGGGTATTCCACCAGACCAA 475 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || ||||| |||| ||| | | || | ||||| || Sbjct 474 CAGAGATTAATTTTTGCTGGAAAACAACTAGAAGATGGCAGAACGCTTAGTGATTATAAT 415 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 |||||||| |||||||| ||||| Sbjct 414 ATTCAAAAGGAATCCACATTACAT 391 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| ||||||||||| || || || | ||| | ||||| ||| | | Sbjct 823 GATGCAGATCTTTGTCAAAACTTTAACTGGAAAGACCATAACTTTGGAAGTAGAATCTTC 764 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | || || | || ||||||||| || || || ||||| ||||| || || Sbjct 763 AGACACTATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCGGACCA 704 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 |||| | ||||| ||||| || |||||||| || ||| | || | |||||||| Sbjct 703 ACAAAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGAGAACATTAAGTGATTACAA 644 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || || || ||||| | ||| | |||| | ||||| Sbjct 643 TATTCAGAAGGAGTCTACATTACATCTTGTTCTTAGATTAAGAGGAGG 596 >seq252373 Length=335 Score = 125 bits (138), Expect = 6e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 22211 TTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGG 22270 ||| || ||||||||||| ||||| ||||| || || || || | ||||| || || | Sbjct 263 TTGCAATCATGCAAATTTTCGTTAAGACTTTGACTGGGAAGACTATAACTCTAGAGGTTG 204 Query 22271 AAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCAC 22330 | | | |||||| | || || | || ||||||||||| || || || ||||| | Sbjct 203 AGGCAAGTGATACCATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGAATTCCCC 144 Query 22331 CCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCG 22390 | || ||||| || | || ||||| ||||||||||| || ||| || || | |||| Sbjct 143 CTGACCAACAGCGATTGATCTTTGCTGGCAAACAGTTGGAAGATGGGCGAACACTGTCCG 84 Query 22391 ATTACAACATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||||| ||||| ||||| | || |||||||||| Sbjct 83 ATTACAATATTCAGAAAGAGTGTACTTTACATTTAGT 47 >seq678478 Length=406 Score = 123 bits (136), Expect = 2e-23 Identities = 163/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 22221 GCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGA 22280 ||||||||| || ||||| | || || ||||| |||| || ||||| ||| | | || Sbjct 1 GCAAATTTTCGTCAAAACCCTTACAGGAAAAACAATCACCCTCGAAGTTGAAGCTTCAGA 60 Query 22281 TACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACA 22340 || | || || | ||| ||||| |||||||| || || ||||||||||||||||| Sbjct 61 CACAATTGAGAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCACCCGATCAACA 120 Query 22341 ACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACAT 22400 | | || ||||| || || || |||| ||| || || | || |||||||| Sbjct 121 GAGATTGATTTTTGCTGGAAAGCAACTAGAAGATGGTCGTACATTGAGTGACTACAACAT 180 Query 22401 TCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| ||||| | ||||||||| |||| ||| | |||||| Sbjct 181 CCAAAAAGAGTCCACACTCCATTTAGTTCTGCGGTTGAGAGGAGGT 226 >seq1656961 Length=2936 Score = 122 bits (134), Expect = 7e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||||||||| ||||| |||||||| | ||||||||||| || | Sbjct 2809 AGATGCAGATCTTTGTTAAAACGTTAACTGGTAAAACCATTACTCTTGAAGTTGAGGCTT 2750 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | ||||| | || || | ||| ||||||||||| ||||| || || || || || | Sbjct 2749 CAGATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACC 2690 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 ||||| | | || || || || ||||| | || ||| || ||| |||| ||||||| Sbjct 2689 AACAAAGATTAATCTTCGCAGGAAAACAACTTGAAGATGGGCGAACCCTCTCTGATTACA 2630 Query 22397 ACATTCAAAAAG 22408 |||| || |||| Sbjct 2629 ACATCCAGAAAG 2618 >seq770237 Length=425 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| |||||||| || || || || | || || ||||| || | Sbjct 51 AAAATGCAGATCTTTGTGAAAACTTTGACTGGGAAGACCATAACACTAGAAGTTGAGCCT 110 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || |||| ||| |||||||| || || ||||| ||||| || Sbjct 111 TCAGATACAATTGAAAATGTCAAGGCAAAGATTCAAGATAAAGAAGGTATCCCACCAGAC 170 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | | || ||||| || |||||| | |||||| || || || || ||| Sbjct 171 CAGCAAAGGTTGATTTTTGCAGGAAAACAGCTTGAGGATGGGCGTACTCTCAGTGACTAC 230 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || |||||||||||||| | |||||||| ||| | ||| | || ||| Sbjct 231 AATATCCAAAAAGAATCCACTCTGCATTTAGTGTTGAGGTTGAGAGGGGGT 281 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| |||||||| || ||||| || |||| |||||||| ||| | | Sbjct 282 ATGCAAATCTTTGTGAAAACTTTGACTGGTAAGACCATCACCCTTGAAGTTGAAGCATCA 341 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||||| |||||||| || || |||||||||||||| Sbjct 342 GACACGATTGAGAATGTTAAGGCTAAAATCCAAGACAAAGAAGGCATTCCACCCGATCAG 401 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 || | | || ||||| || || Sbjct 402 CAGAGATTAATTTTTGCTGGAAA 424 >seq1135619 Length=547 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| ||||| ||||| || || || ||||||||||||| ||| | | Sbjct 143 ATGCAAATATTTGTCAAAACCTTAACTGGAAAGACCATCACTCTTGAAGTTGAACCTTCA 202 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || ||||| ||||| || || || || ||||| || || Sbjct 203 GATACAATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGAATCCCACCAGACCAG 262 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || || || | || ||| ||||| | || |||||| Sbjct 263 CAGAGATTGATTTTTGCTGGAAAGCAACTTGAAGATGGTCGCACACTGAGTGACTACAAC 322 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| || ||||| | |||||||| ||| | || | ||||| Sbjct 323 ATCCAAAAGGAGTCCACTCTTCATTTAGTATTGAGGCTGAGAGGAGG 369 >seq242576 Length=334 Score = 98.7 bits (108), Expect = 8e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| ||||||||||| || || || | ||| | ||||| ||| | | Sbjct 184 GATGCAGATCTTTGTCAAAACTTTAACTGGAAAGACCATAACTTTGGAAGTAGAATCGTC 125 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | || || | || ||||||||| || || || ||||| ||||| || || Sbjct 124 AGACACTATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCGGACCA 65 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374 |||| | ||||| ||||| || |||||||| || ||| Sbjct 64 ACAAAGGCTTATCTTTGCAGGGAAACAGTTGGAAGAT 28 Score = 93.3 bits (102), Expect = 3e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 22302 AAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAA 22361 ||||||||| || || || ||||| ||||| ||||||||| | ||||||||||| || || Sbjct 328 AAAAATTCAGGATAAAGAAGGTATCCCACCAGATCAACAAAGGCTTATATTTGCTGGTAA 269 Query 22362 ACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACA 22421 ||| | || ||| | || | |||||| || || |||||||||||||| | || Sbjct 268 ACAACTTGAAGATGGTAGAACATTGAGCGATTATAATATACAAAAAGAATCCACGCTTCA 209 Query 22422 TTTAGTTTTGCGATTGCGCGGAGG 22445 | | ||| | || ||| | ||||| Sbjct 208 TCTTGTTCTTCGGTTGAGGGGAGG 185 >seq123891 Length=317 Score = 98.7 bits (108), Expect = 8e-16 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| |||||||| || || || || |||||||| | ||| | || || ||| | Sbjct 142 AGATGCAGATTTTTGTAAAGACATTGACTGGTAAAACTATAACTTTGGAGGTAGAACCTT 83 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | |||||| | || || | || ||||||||| || || || ||||| ||||| |||| Sbjct 82 CTGATACCATTGAAAATGTAAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCAGATC 23 Query 22337 AACAACGTCTTATATTTGCCGG 22358 ||||| | ||||||||||| || Sbjct 22 AACAAAGGCTTATATTTGCTGG 1 >seq663341 Length=403 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| |||||||| || || |||||||||||||| || | | || ||||| || || Sbjct 35 AAAATCCAAGACAAAGAAGGCATTCCACCCGATCAGCAGAGATTAATTTTTGCTGGAAAG 94 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || |||| ||| || || | || |||||||| |||||||||||||| | ||| Sbjct 95 CAACTAGAAGATGGTCGTACATTGAGTGACTACAACATCCAAAAAGAATCCACACTCCAT 154 Query 22423 TTAGTTTTGCGATTGCGCGGAGG 22445 |||||| |||| ||| | ||||| Sbjct 155 TTAGTTCTGCGGTTGAGAGGAGG 177 Score = 95.1 bits (104), Expect = 1e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| |||||| | || || ||||| | || || || || ||| | | Sbjct 179 ATGCAAATCTTTGTGAAAACTCTTACGGGGAAAACTATTACCCTAGAGGTTGAAGCATCT 238 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| |||||| ||||| || |||||||||||||| || || Sbjct 239 GACACTATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAGGGTATTCCACCAGACCAG 298 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || || || | || ||| || || | || || || Sbjct 299 CAGAGATTAATTTTTGCTGGAAAGCAACTTGAAGATGGTCGTACTCTTAGTGACTATAAT 358 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGA 22443 || || ||||||||||| | ||||||||| || | ||| | ||| Sbjct 359 ATCCAGAAAGAATCCACACTCCATTTAGTTCTGAGGTTGAGAGGA 403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411218187413140