Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1561256 102 2e-16 seq1268732 100 6e-16 seq315950 100 6e-16 seq1037836 98.7 2e-15 seq586925 91.5 3e-13 seq188415 91.5 3e-13 seq1064196 87.8 4e-12 seq1577286 84.2 4e-11 seq401641 84.2 4e-11 >seq1561256 Length=1203 Score = 102 bits (112), Expect = 2e-16 Identities = 72/81 (89%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 142495 GGTGAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTG 142554 ||| ||| ||||||| |||||||||||||||||| | ||||||||||||| | ||||||| Sbjct 740 GGTTAGA-AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTG 798 Query 142555 GGTTCGAGCCCCACATCGGGC 142575 |||||||||||||| | |||| Sbjct 799 GGTTCGAGCCCCACGTTGGGC 819 >seq1268732 Length=629 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 459 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 518 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 519 CCCCACGTTGGGC 531 >seq315950 Length=345 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||||| ||||||||||||||| Sbjct 169 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTAGGGGTCGTGGGTTCGAG 228 Query 142563 CCCCACATCGGGC 142575 ||||| | |||| Sbjct 229 TCCCACGTTGGGC 241 >seq1037836 Length=504 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||||| Sbjct 90 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 149 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 150 CCCACGTTGGGC 161 >seq586925 Length=389 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||| | ||| | ||||||||||||| | ||||||||||||||| Sbjct 319 AGCCCGGCTAGCTCAGTCGGGAAAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 260 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 259 CCCCACGTTGGGC 247 >seq188415 Length=326 Score = 91.5 bits (100), Expect = 3e-13 Identities = 58/63 (92%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 ||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||||| Sbjct 63 CCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCC 4 Query 142565 CCA 142567 ||| Sbjct 3 CCA 1 >seq1064196 Length=515 Score = 87.8 bits (96), Expect = 4e-12 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 142512 AGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCACATC 142571 ||||||||||||||||| | ||||||||||||| | ||||||||||||||||||||| | Sbjct 515 AGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCCCCACGTT 456 Query 142572 GGG 142574 ||| Sbjct 455 GGG 453 >seq1577286 Length=1288 Score = 84.2 bits (92), Expect = 4e-11 Identities = 59/66 (89%), Gaps = 1/66 (2%) Strand=Plus/Plus Query 142515 TCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCACATCGGG 142574 |||||||||||||| | ||||||||||||| | ||||||||||||||||||||| | ||| Sbjct 1 TCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCCCCACGTTGGG 60 Query 142575 C-AGAA 142579 | |||| Sbjct 61 CGAGAA 66 >seq401641 Length=358 Score = 84.2 bits (92), Expect = 4e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 ||||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||| Sbjct 300 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGA 358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1005929166530596