Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq678478 163 5e-35 seq1488354 156 8e-33 seq1135619 152 9e-32 seq242576 145 1e-29 seq770237 125 1e-23 seq1656961 122 2e-22 seq1605470 111 3e-19 seq663341 107 3e-18 seq1561256 86.0 1e-11 seq1268732 86.0 1e-11 seq1037836 86.0 1e-11 >seq678478 Length=406 Score = 163 bits (180), Expect = 5e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 |||| || || || || |||||||||||||||||||| || || | ||| | ||| Sbjct 213 CGCAGAACTAAATGGAGTGTGGACTCTTTTTGGATGTTGTAGTCACTCAATGTACGACCA 154 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||||| ||||| || || || || | ||| ||||| ||||||||||||||||| ||| Sbjct 153 TCTTCTAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCGGGTGGAATGCCTTCTTTG 94 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 ||||| || || || || || ||| || ||||||| | ||| ||||| | |||||| Sbjct 93 TCTTGGATTTTAGCTTTTACATTCTCAATTGTGTCTGAAGCTTCAACTTCGAGGGTGATT 34 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459 |||||||| || ||||| |||||||| || ||| Sbjct 33 GTTTTTCCTGTAAGGGTTTTGACGAAAATTTGC 1 >seq1488354 Length=939 Score = 156 bits (172), Expect = 8e-33 Identities = 160/208 (77%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| |||| || ||||| || || || || ||||| | ||| ||||||||||| | Sbjct 615 CAAGATGTAATGTAGACTCCTTCTGAATATTGTAATCACTTAATGTTCTCCCATCTTCCA 674 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||| ||||| || || || || ||||||||||| ||||| || ||||| || || |||| Sbjct 675 ACTGTTTCCCTGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATACCTTCTTTATCCTGAA 734 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | |||||||| || || || ||||||| |||||||||||||| || ||||| |||| Sbjct 735 TTTTTGCCTTAACATTTTCAATAGTGTCTGAAGATTCTACTTCCAAAGTTATGGTCTTTC 794 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | || ||||| || |||||||| Sbjct 795 CAGTTAAAGTTTTGACAAAGATCTGCAT 822 Score = 149 bits (164), Expect = 1e-30 Identities = 159/209 (76%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| |||| ||||| || ||||| || |||||||| || || || |||||||||| Sbjct 387 CAAGATGTAATGTGGATTCCTTTTGAATATTATAATCACTAAGCGTTCTGCCATCTTCTA 446 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 || || || || || || | ||| |||||||| |||||||| || || || || |||| Sbjct 447 GTTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCCTCTTTATCCTGAA 506 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | ||||| || || || || ||||||| | ||||||||||||||||| ||||||| Sbjct 507 TTTTTGCTTTCACATTTTCAATTGTGTCTGAAGGCTCTACTTCCAAGGTGATAGTTTTTC 566 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||| | |||||| || || || |||||| Sbjct 567 CCGTTAAGGTCTTCACAAAAATTTGCATT 595 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || | ||| || || || || || || |||||||| || || || || Sbjct 140 CCTCCCCTGAGCCTCAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTC 199 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| || |||||||| || || || || || ||||| || ||||||||||| |||||| Sbjct 200 AATGTTCTTCCATCTTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGGA 259 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || || || ||||| ||||| ||||| || |||||||| | | ||||||| Sbjct 260 ATACCCTCTTTATCCTGAATTTTTGCTTTGACATTTTCTATGGTGTCAGAAGGTTCTACT 319 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||| || || ||||| || || || || || || || || |||||| Sbjct 320 TCCAAAGTAATAGTTTTACCAGTTAGAGTTTTCACAAAAATTTGCATT 367 >seq1135619 Length=547 Score = 152 bits (168), Expect = 9e-32 Identities = 174/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 |||||||||||| | || | |||||| || || || |||||||| ||||||||||| || Sbjct 376 TTAATTTCCTCCTCTCAGCCTCAATACTAAATGAAGAGTGGACTCCTTTTGGATGTTGTA 317 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 || ||||| | |||||||| | ||||| || || || || | ||| || ||||| Sbjct 316 GTCACTCAGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGGTC 257 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 ||||| || ||||| || ||||| || || ||||| || || || || |||| | Sbjct 256 TGGTGGGATTCCTTCTTTATCTTGGATTTTAGCCTTAACATTTTCAATTGTATCTGAAGG 197 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| ||||| | |||||||| ||||| || | ||| ||||| ||||| ||||| Sbjct 196 TTCAACTTCAAGAGTGATGGTCTTTCCAGTTAAGGTTTTGACAAATATTTGCAT 143 Score = 109 bits (120), Expect = 1e-18 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 68252 TACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311 ||||||||| ||||| || || ||||||||||| |||||| ||||| | |||||||| Sbjct 124 TACCAAGTGGAGCGTAGATTCCTTTTGGATGTTGTAATCGCTAAGTGTGCGACCATCTTC 65 Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371 | ||||| || || || || | ||| || || ||||||||||||||||| |||||||| Sbjct 64 AAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGATCGGGTGGAATGCCTTCTTTGTCTTG 5 Query 68372 AAT 68374 || Sbjct 4 GAT 2 >seq242576 Length=334 Score = 145 bits (160), Expect = 1e-29 Identities = 131/165 (79%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 68297 TGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAAT 68356 ||| ||||||||||| ||||| ||||| || || || || ||||||||||| ||||| || Sbjct 19 TGTTCTCCCATCTTCCAACTGTTTCCCTGCAAAGATAAGCCTTTGTTGGTCCGGTGGGAT 78 Query 68357 GCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTC 68416 ||||| || || ||||| |||||||| || || || ||||||| ||||||||||| Sbjct 79 ACCTTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATAGTGTCTGACGATTCTACTTC 138 Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || ||||| ||||| || | || ||||| || |||||||| Sbjct 139 CAAAGTTATGGTCTTTCCAGTTAAAGTTTTGACAAAGATCTGCAT 183 >seq770237 Length=425 Score = 125 bits (138), Expect = 1e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || || || || ||||| ||||||||||| || || || ||| || | |||||| Sbjct 266 CAACACTAAATGCAGAGTGGATTCTTTTTGGATATTGTAGTCACTGAGAGTACGCCCATC 207 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 || | ||| || || || || || | ||||| ||||| ||||| || ||||| || || Sbjct 206 CTCAAGCTGTTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGTGGGATACCTTCTTTATC 147 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||||||||||||||| || || || |||| | || ||||| | || ||||| Sbjct 146 TTGAATCTTTGCCTTGACATTTTCAATTGTATCTGAAGGCTCAACTTCTAGTGTTATGGT 87 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || | || || || || ||||||||| Sbjct 86 CTTCCCAGTCAAAGTTTTCACAAAGATCTGCATT 53 Score = 102 bits (112), Expect = 1e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || || || || | ||| || || ||||||||||||||||| |||||||| || || Sbjct 425 CTTTCCAGCAAAAATTAATCTCTGCTGATCGGGTGGAATGCCTTCTTTGTCTTGGATTTT 366 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 ||||| || ||| || ||||||| || ||| ||||| | ||||||||| || || || Sbjct 365 AGCCTTAACATTCTCAATCGTGTCTGATGCTTCAACTTCAAGGGTGATGGTCTTACCAGT 306 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 | || || || || || ||||| Sbjct 305 CAAAGTTTTCACAAAGATTTGCAT 282 >seq1656961 Length=2936 Score = 122 bits (134), Expect = 2e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 68272 CTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATA 68331 |||| |||||||| ||||| ||||| || | ||||||||| | || || || ||||| | Sbjct 2618 CTTTCTGGATGTTGTAATCAGAGAGGGTTCGCCCATCTTCAAGTTGTTTTCCTGCGAAGA 2677 Query 68332 TGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCT 68391 | | |||||||||||| || || || |||||||| |||||||| || || || || | Sbjct 2678 TTAATCTTTGTTGGTCAGGAGGGATTCCTTCCTTATCTTGAATTTTGGCTTTTACATTTT 2737 Query 68392 CGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 | || || |||| | || ||||| | || |||||||| || || | || || || | Sbjct 2738 CAATAGTATCTGAAGCCTCAACTTCAAGAGTAATGGTTTTACCAGTTAACGTTTTAACAA 2797 Query 68452 ATATCTGCAT 68461 | |||||||| Sbjct 2798 AGATCTGCAT 2807 >seq1605470 Length=1495 Score = 111 bits (122), Expect = 3e-19 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 |||||||||||| | || | |||||| || || || |||||||| ||||||||||| || Sbjct 161 TTAATTTCCTCCTCTCAGCCTCAATACTAAATGAAGAGTGGACTCCTTTTGGATGTTGTA 102 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 || ||||| | |||||||| | ||||| || || || || | ||| || ||||| Sbjct 101 GTCACTCAGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGGTC 42 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGAC 68386 ||||| || ||||| || ||||| || || ||||| || Sbjct 41 TGGTGGGATTCCTTCTTTATCTTGGATTTTAGCCTTAAC 3 >seq663341 Length=403 Score = 107 bits (118), Expect = 3e-18 Identities = 118/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 |||| || || || || ||||| |||||||||||||| || || | ||| | ||| Sbjct 165 CGCAGAACTAAATGGAGTGTGGATTCTTTTTGGATGTTGTAGTCACTCAATGTACGACCA 106 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||||| ||||| || || || || | ||| || || ||||||||||||||||| ||| Sbjct 105 TCTTCTAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGATCGGGTGGAATGCCTTCTTTG 46 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTG 68403 ||||| || || || || || ||||| ||||||| Sbjct 45 TCTTGGATTTTAGCTTTTACATTTTCGATAGTGTCTG 9 >seq1561256 Length=1203 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 748 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 807 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 808 CCCACGTTGGGC 819 >seq1268732 Length=629 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 460 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 519 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 520 CCCACGTTGGGC 531 >seq1037836 Length=504 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 90 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 149 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 150 CCCACGTTGGGC 161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902457769084320