Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq252373 138 3e-27 seq1135619 125 2e-23 seq1656961 109 1e-18 seq770237 109 1e-18 seq242576 109 1e-18 seq1488354 107 4e-18 seq678478 107 4e-18 seq663341 100 7e-16 seq1605470 84.2 5e-11 >seq252373 Length=335 Score = 138 bits (152), Expect = 3e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 ||||| ||||| | ||| | || | ||||| || ||||| || |||| || || || Sbjct 38 AGTCTGAGTACTAAATGTAAAGTACACTCTTTCTGAATATTGTAATCGGACAGTGTTCGC 97 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 || ||||| || ||||| || || ||||||| |||||||| | || ||||||||| Sbjct 98 CCATCTTCCAACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATTCCTTCT 157 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 ||||| || ||||| || || || ||||| || | ||| || | || || || || || Sbjct 158 TTATCTTGAATTTTAGCCTTTACATTTTCAATGGTATCACTTGCCTCAACCTCTAGAGTT 217 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 || |||||||| |||| |||||| ||||| || ||||| || Sbjct 218 ATAGTCTTCCCAGTCAAAGTCTTAACGAAAATTTGCATGAT 258 >seq1135619 Length=547 Score = 125 bits (138), Expect = 2e-23 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 288235 ATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATA 288294 |||||| || ||| || | || || | ||| | ||||| ||| || |||||||| Sbjct 381 ATTCATTAATTTCCTCCTCTCAGCCTCAATACTAAATGAAGAGTGGACTCCTTTTGGATG 322 Query 288295 TTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGT 288354 || ||||| || ||||| || ||||| | ||| ||||| || || |||| | ||| Sbjct 321 TTGTAGTCACTCAGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGC 262 Query 288355 TGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG 288414 || |||||||||||||||||| |||||||| || || || ||||| || | ||| Sbjct 261 TGGTCTGGTGGGATTCCTTCTTTATCTTGGATTTTAGCCTTAACATTTTCAATTGTATCT 202 Query 288415 CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||| ||||| || ||||| ||||| || || | || ||||| ||||| ||||| Sbjct 201 GAAGGTTCAACTTCAAGAGTGATGGTCTTTCCAGTTAAGGTTTTGACAAATATTTGCAT 143 >seq1656961 Length=2936 Score = 109 bits (120), Expect = 1e-18 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| ||||| || || || | ||| || || || ||||| | ||||||||||||||||| Sbjct 2618 CTTTCTGGATGTTGTAATCAGAGAGGGTTCGCCCATCTTCAAGTTGTTTTCCTGCGAAGA 2677 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 | | | ||||| | ||||||||||| ||||| || ||||| ||||| || |||| Sbjct 2678 TTAATCTTTGTTGGTCAGGAGGGATTCCTTCCTTATCTTGAATTTTGGCTTTTACATTTT 2737 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 | |||| ||| | || ||||| || || || || || || || | || || || | Sbjct 2738 CAATAGTATCTGAAGCCTCAACTTCAAGAGTAATGGTTTTACCAGTTAACGTTTTAACAA 2797 Query 288464 ATATCTGCAT 288473 | |||||||| Sbjct 2798 AGATCTGCAT 2807 >seq770237 Length=425 Score = 109 bits (120), Expect = 1e-18 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||||||||| ||||| ||| || || || || || | ||||||||||| || Sbjct 245 TTCTTTTTGGATATTGTAGTCACTGAGAGTACGCCCATCCTCAAGCTGTTTTCCTGCAAA 186 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | || || |||||| ||||||||||| || || || || || || || Sbjct 185 AATCAACCTTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGAATCTTTGCCTTGACATT 126 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | ||| | || ||||| || || || |||||||| |||| ||| || || Sbjct 125 TTCAATTGTATCTGAAGGCTCAACTTCTAGTGTTATGGTCTTCCCAGTCAAAGTTTTCAC 66 Query 288462 GAATATCTGCATT 288474 || ||||||||| Sbjct 65 AAAGATCTGCATT 53 >seq242576 Length=334 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 || ||||| || ||||| ||||| ||||| || | ||||| |||||| |||||| Sbjct 26 CCATCTTCCAACTGTTTCCCTGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATACCTTCT 85 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 |||||||| ||||| || || || ||||| |||| || |||||||||||| | || Sbjct 86 TTATCCTGAATTTTTGCCTTAACATTTTCAATAGTGTCTGACGATTCTACTTCCAAAGTT 145 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || | ||| ||||| || |||||||| Sbjct 146 ATGGTCTTTCCAGTTAAAGTTTTGACAAAGATCTGCAT 183 Score = 86.0 bits (94), Expect = 1e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 ||| || ||||||| |||| ||||||||| |||||||| ||| | || | || || Sbjct 199 AAGAACAAGATGAAGCGTGGATTCTTTTTGTATATTATAATCGCTCAATGTTCTACCATC 258 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 ||| | |||||| || || || || || | |||||| |||||| ||||||||||| Sbjct 259 TTCAAGTTGTTTACCAGCAAATATAAGCCTTTGTTGATCTGGTGGGATACCTTCTTTATC 318 Query 288381 CTGGATTTTCGCTTT 288395 ||| ||||| || || Sbjct 319 CTGAATTTTTGCCTT 333 >seq1488354 Length=939 Score = 107 bits (118), Expect = 4e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 ||| || ||||| | ||| ||| ||||| |||||||| || ||||| | || || Sbjct 382 AAGCACAAGATGTAATGTGGATTCCTTTTGAATATTATAATCACTAAGCGTTCTGCCATC 441 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 ||||| ||||||||| || || || | | |||||| ||| || || |||||||| Sbjct 442 TTCTAGTTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCCTCTTTATC 501 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 ||| ||||| |||||||| ||||| || | || | |||||||| | ||||| || Sbjct 502 CTGAATTTTTGCTTTCACATTTTCAATTGTGTCTGAAGGCTCTACTTCCAAGGTGATAGT 561 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || | ||||| || || || |||||| Sbjct 562 TTTTCCCGTTAAGGTCTTCACAAAAATTTGCATT 595 Score = 105 bits (116), Expect = 2e-17 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| ||||| ||||| | || | ||| ||||| ||||||||||| || || Sbjct 175 TTCTTTTTGAATATTGTAGTCACTCAATGTTCTTCCATCTTCCAATTGTTTTCCAGCAAA 234 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | ||||| ||| || || ||||||||||| ||||| ||||| || || Sbjct 235 TATAAGCCTTTGTTGGTCTGGTGGAATACCCTCTTTATCCTGAATTTTTGCTTTGACATT 294 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 |||||| | || | ||||||||| | || || || || || || ||||| || || Sbjct 295 TTCTATGGTGTCAGAAGGTTCTACTTCCAAAGTAATAGTTTTACCAGTTAGAGTTTTCAC 354 Query 288462 GAATATCTGCATT 288474 || || |||||| Sbjct 355 AAAAATTTGCATT 367 Score = 105 bits (116), Expect = 2e-17 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 |||||| || ||||| | || || || || ||||| || || | || | || Sbjct 607 TCTAAGAACAAGATGTAATGTAGACTCCTTCTGAATATTGTAATCACTTAATGTTCTCCC 666 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTT 288377 ||||| || ||||| ||||| ||||| || | ||||| |||||| |||||||| Sbjct 667 ATCTTCCAACTGTTTCCCTGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATACCTTCTTT 726 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 |||||| ||||| || || || ||||| |||| || ||||||||||| | || || Sbjct 727 ATCCTGAATTTTTGCCTTAACATTTTCAATAGTGTCTGAAGATTCTACTTCCAAAGTTAT 786 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || | ||| ||||| || |||||||| Sbjct 787 GGTCTTTCCAGTTAAAGTTTTGACAAAGATCTGCAT 822 >seq678478 Length=406 Score = 107 bits (118), Expect = 4e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| || ||||| | || || || ||||||| ||| ||||| || || Sbjct 189 TCTTTTTGGATGTTGTAGTCACTCAATGTACGACCATCTTCTAGTTGCTTTCCAGCAAAA 130 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||||||| ||| || |||||||| || |||||||| ||||| || || Sbjct 129 ATCAATCTCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTC 70 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || | ||| |||||||| ||||| || || || || || || |||||| Sbjct 69 TCAATTGTGTCTGAAGCTTCAACTTCGAGGGTGATTGTTTTTCCTGTAAGGGTTTTGACG 10 Query 288463 AATATCTGC 288471 || || ||| Sbjct 9 AAAATTTGC 1 >seq663341 Length=403 Score = 100 bits (110), Expect = 7e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 || || || | ||| | ||| |||||| |||||||||||||| || || || || Sbjct 393 CTCAGAACTAAATGGAGTGTGGATTCTTTCTGGATATTATAGTCACTAAGAGTACGACCA 334 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTA 288378 ||||| | ||| ||||| || || || | | ||| || ||| || || |||||| Sbjct 333 TCTTCAAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGGTCTGGTGGAATACCCTCTTTA 274 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 || |||||||| ||||| || ||||| |||| || | ||| || || || || || Sbjct 273 TCTTGGATTTTTGCTTTTACATTTTCGATAGTGTCAGATGCTTCAACCTCTAGGGTAATA 214 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || ||||| || || || || ||||| Sbjct 213 GTTTTCCCCGTAAGAGTTTTCACAAAGATTTGCAT 179 >seq1605470 Length=1495 Score = 84.2 bits (92), Expect = 5e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 288235 ATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATA 288294 |||||| || ||| || | || || | ||| | ||||| ||| || |||||||| Sbjct 166 ATTCATTAATTTCCTCCTCTCAGCCTCAATACTAAATGAAGAGTGGACTCCTTTTGGATG 107 Query 288295 TTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGT 288354 || ||||| || ||||| || ||||| | ||| ||||| || || |||| | ||| Sbjct 106 TTGTAGTCACTCAGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGC 47 Query 288355 TGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 || |||||||||||||||||| |||||||| || || || Sbjct 46 TGGTCTGGTGGGATTCCTTCTTTATCTTGGATTTTAGCCTTAAC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1154510878950968