Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1374022 111 2e-19 seq1488354 109 6e-19 seq37400 96.9 4e-15 seq1339226 95.1 1e-14 seq1294437 95.1 1e-14 seq1576232 86.0 7e-12 seq663341 86.0 7e-12 seq1610295 84.2 2e-11 seq193060 82.4 8e-11 >seq1374022 Length=732 Score = 111 bits (122), Expect = 2e-19 Identities = 82/95 (86%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 56993 TTATGAAAAAT--TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCG 57050 ||||| |||| ||||||| |||| | |||||||||| |||||||||||||||||||| Sbjct 343 TTATGTAAAAAGATTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCG 284 Query 57051 GACATACTCACCACTATACTACCGAGGATTGAATA 57085 | ||||||||||||||||||||||||| ||| || Sbjct 283 GGGATACTCACCACTATACTACCGAGGAATGAGTA 249 >seq1488354 Length=939 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||||||||| | ||| | ||| |||||| |||||||||||||| |||||| Sbjct 368 CCACCTCTTAAACGAAGCACAAGATGTAATGTGGATTCCTTTTGAATATTATAATCACTA 427 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || | | || ||||| || || ||||| || || | || ||| ||||| | ||| Sbjct 428 AGCGTTCTGCCATCTTCTAGTTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGTGGA 487 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||| || ||| ||| |||||| ||| | | | | ||||| | || || Sbjct 488 ATACCCTCTTTATCC-TGAATTTTTGCTTTCACATTTTCAATTGTGTCTGAAGGCTCTAC 546 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | ||||| ||||| ||||||| ||||| ||||| ||||||||| Sbjct 547 TTCCAAGGTGATAGTTTTTCCCGTTAAGGTCTTCACAAAAATTTGCATT 595 >seq37400 Length=305 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062 |||||||| |||| | |||||||||| ||||||||||||||||||||| |||||||| Sbjct 146 TTTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGGTACTCACC 205 Query 57063 ACTATACTACCGAGGA 57078 |||||| ||||||||| Sbjct 206 ACTATAATACCGAGGA 221 >seq1339226 Length=692 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| |||||||||| |||||||||| ||||||||||||| Sbjct 553 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCATGACAGGCGGGGATACTCACCACTA 612 Query 57067 TACTACCGAGGA 57078 |||||||||||| Sbjct 613 TACTACCGAGGA 624 >seq1294437 Length=650 Score = 95.1 bits (104), Expect = 1e-14 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 57009 CCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATA 57068 || |||| | |||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct 522 CCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATA 463 Query 57069 CTACCGAGGA 57078 |||||||||| Sbjct 462 CTACCGAGGA 453 Score = 86.0 bits (94), Expect = 7e-12 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 57024 GAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 650 GAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTACCGAGGA 596 >seq1576232 Length=1282 Score = 86.0 bits (94), Expect = 7e-12 Identities = 60/67 (90%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 57019 AAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 ||||||||||| ||||||||||||||||||||| |||| |||||||||||| || |||| Sbjct 858 AAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACCCACCACTATACTGCCAAGGA 799 Query 57079 TTGAATA 57085 |||||| Sbjct 798 -TGAATA 793 >seq663341 Length=403 Score = 86.0 bits (94), Expect = 7e-12 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 41984 TCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAG 42043 |||||| || | || || ||||| | |||| || || || ||||| || ||| || Sbjct 403 TCCTCTCAACCTCAGAACTAAATGGAGTGTGGATTCTTTCTGGATATTATAGTCACTAAG 344 Query 42044 AGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCAC 42103 ||| || | || || || ||||| ||||| || || | || ||||||||| | ||| | Sbjct 343 AGTACGACCATCTTCAAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGGTCTGGTGGAAT 284 Query 42104 GCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATC 42163 | ||| || || ||||||| ||| | | | | ||||| | ||| || || Sbjct 283 ACCCTCTTTATCTTGGATTTTTGCTTTTACATTTTCGATAGTGTCAGATGCTTCAACCTC 224 Query 42164 GACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || ||||| ||||| || || || |||||||||||||| Sbjct 223 TAGGGTAATAGTTTTCCCCGTAAGAGTTTTCACAAAGATTTGCAT 179 >seq1610295 Length=1542 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/73 (86%), Gaps = 2/73 (3%) Strand=Plus/Minus Query 56998 AAAAATTT--TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 |||||| | ||||| |||| | |||||||||| ||||||||||||||||||||| || Sbjct 73 AAAAATATCCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 14 Query 57056 ACTCACCACTATA 57068 ||||||||||||| Sbjct 13 ACTCACCACTATA 1 >seq193060 Length=327 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||||||| | ||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 72 AAAAATTTACCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 13 Query 57057 CTCACCACTATA 57068 || ||||||||| Sbjct 12 CTTACCACTATA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531916988591040