Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1488354 109 5e-19 seq678478 104 2e-17 seq770237 98.7 1e-15 seq252373 89.7 5e-13 seq663341 87.8 2e-12 seq242576 82.4 7e-11 >seq1488354 Length=939 Score = 109 bits (120), Expect = 5e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| |||||||| | | | || || |||||||| |||||||| |||| || | || Sbjct 154 CAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTCAATGTTCTTCCATC 213 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 || | |||||| || | | | || || | |||||||| || || ||||| ||||| || Sbjct 214 TTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGGAATACCCTCTTTATC 273 Query 138522 GGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| |||||| ||| | | ||| | |||||| | | || || || | || | | Sbjct 274 C-TGAATTTTTGCTTTGACATTTTCTATGGTGTCAGAAGGTTCTACTTCCAAAGTAATAG 332 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||||| |||||||| |||||||| ||||| Sbjct 333 TTTTACCAGTTAGAGTTTTCACAAAAATTTGCAT 366 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| | ||||| | |||||||| ||||| ||||| || || | || | | || || Sbjct 613 AACAAGATGTAATGTAGACTCCTTCTGAATATTGTAATCACTTAATGTTCTCCCATCTTC 672 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||| || | | |||| || | ||||||||||| || ||||||||||| || | Sbjct 673 CAACTGTTTCCCTGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATACCTTCTTTATC-CT 731 Query 138525 GATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 || |||||| |||| | ||| | ||||| | || || || || | || | || | Sbjct 732 GAATTTTTGCCTTAACATTTTCAATAGTGTCTGAAGATTCTACTTCCAAAGTTATGGTCT 791 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | ||||| | |||||| ||||| |||||||| Sbjct 792 TTCCAGTTAAAGTTTTGACAAAGATCTGCAT 822 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||||| | || | ||||| | || ||||||||||| || || || || Sbjct 368 CCACCTCTTAAACGAAGCACAAGATGTAATGTGGATTCCTTTTGAATATTATAATCACTA 427 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | || | || || |||||||| || | | | |||| | ||||||||| || || Sbjct 428 AGCGTTCTGCCA-TCTTCTAGTTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGTGG 486 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| ||||| || ||| |||||| ||| | | ||| | ||||| | | ||| | Sbjct 487 AATACCCTCTTTATC-CTGAATTTTTGCTTTCACATTTTCAATTGTGTCTGAAGGCTCTA 545 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | ||||| || || | || || |||||||| ||||| Sbjct 546 CTTCCAAGGTGATAGTTTTTCCCGTTAAGGTCTTCACAAAAATTTGCAT 594 >seq678478 Length=406 Score = 104 bits (114), Expect = 2e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| |||| ||||||||| | | ||||| ||||| ||||||||||| ||| Sbjct 225 CCTCCTCTCAACCGCAGAACTAAATGGAGTGTGGACTCTTTTTGGATGTTGTAGTCACTC 166 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || ||||| || || | | | || | | |||||| || || || Sbjct 165 AATGTACGACCATCTTCTAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCGGGTGGA 106 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| |||||| ||||| | || | ||||| | | || || Sbjct 105 ATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTCTCAATTGTGTCTGAAGCTTCAACT 46 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGC 138612 |||| || | ||||| || || || ||||| || ||||| ||| Sbjct 45 TCGAGGGTGATTGTTTTTCCTGTAAGGGTTTTGACGAAAATTTGC 1 >seq770237 Length=425 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| |||||||| | | || || ||||| || |||||||| || Sbjct 280 CCCCCTCTCAACCTCAACACTAAATGCAGAGTGGATTCTTTTTGGATATTGTAGTCACTG 221 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||||| ||||| || ||||| || | | | || | | || ||||| || || Sbjct 220 AGAGTACGCCCATCCTCAAGCTGTTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGTGGG 161 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||||||||| || ||| | |||| || | | ||| | || || | | ||| || Sbjct 160 ATACCTTCTTTATC-TTGAATCTTTGCCTTGACATTTTCAATTGTATCTGAAGGCTCAAC 102 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||||| |||||| ||||| |||||||| Sbjct 101 TTCTAGTGTTATGGTCTTCCCAGTCAAAGTTTTCACAAAGATCTGCAT 54 >seq252373 Length=335 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||||||||| | |||| || ||||| ||||| ||| || || ||| || || Sbjct 47 ACTAAATGTAAAGTACACTCTTTCTGAATATTGTAATCGGACAGTGTTCGCCCATCTTCC 106 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||| || | | |||| | ||||||||||| || || || |||||||| || || Sbjct 107 AACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATTCCTTCTTTATC-TTG 165 Query 138526 ATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 | |||| | |||| | ||| | ||| || | | ||| ||||| | || | || || Sbjct 166 AATTTTAGCCTTTACATTTTCAATGGTATCACTTGCCTCAACCTCTAGAGTTATAGTCTT 225 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||||| ||| || || ||||| |||||| Sbjct 226 CCCAGTCAAAGTCTTAACGAAAATTTGCATG 256 >seq663341 Length=403 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| ||| |||| ||||||||| | | || || ||||| ||||||||||| || Sbjct 178 GCCTCCTCTCAACCGCAGAACTAAATGGAGTGTGGATTCTTTTTGGATGTTGTAGTCACT 119 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||||| || || ||||| || || | | | |||| | ||| || || || || Sbjct 118 CAATGTACGACCATCTTCTAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGATCGGGTGG 59 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTC 138554 || ||||||||||| |||||| ||||| | ||| | ||||| Sbjct 58 AATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCGATAGTGTC 11 >seq242576 Length=334 Score = 82.4 bits (90), Expect = 7e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 138469 TGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATT 138528 ||||| || | | |||| || | ||||||||||| || ||||||||||| || ||| | Sbjct 38 TGTTTCCCTGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATACCTTCTTTATC-CTGAAT 96 Query 138529 TTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACC 138587 ||||| |||| | ||| | ||||| | ||| || || || | || | || || || Sbjct 97 TTTTGCCTTAACATTTTCAATAGTGTCTGACGATTCTACTTCCAAAGTTATGGTCTTTCC 156 Query 138588 AGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | |||||| ||||| |||||||| Sbjct 157 AGTTAAAGTTTTGACAAAGATCTGCAT 183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485942896336320