Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1488354 154 1e-32 seq252373 127 1e-24 seq1656961 114 9e-21 seq1135619 105 5e-18 >seq1488354 Length=939 Score = 154 bits (170), Expect = 1e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 14962 CTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCG 15021 || || ||||||||||||||||| |||||||| || ||||| || || | |||| | Sbjct 152 CTCAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTCAATGTTCTTCCA 211 Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 ||||| |||||||| ||||| |||| | | |||||||| |||||| || || || Sbjct 212 TCTTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGGAATACCCTCTTTA 271 Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 || |||||| ||| ||| ||||||| || || | |||||| || || ||||| Sbjct 272 TCCTGAATTTTTGCTTTGACATTTTCTATGGTGTCAGAAGGTTCTACTTCCAAAGTAATA 331 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||||||| || |||||||| |||||||||||||| Sbjct 332 GTTTTACCAGTTAGAGTTTTCACAAAAATTTGCAT 366 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCA 15039 || || || ||||| || || ||||| || || |||| | ||||||| |||||| ||| Sbjct 398 GTGGATTCCTTTTGAATATTATAATCACTAAGCGTTCTGCCATCTTCTAGTTGTTTTCCA 457 Query 15040 GCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTT 15099 || | || || | ||||||||| |||||| || || || || |||||| ||| Sbjct 458 GCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCCTCTTTATCCTGAATTTTTGCTTTC 517 Query 15100 ACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTT 15159 ||| |||| || || || | ||||| || ||||| || ||||| || || | || Sbjct 518 ACATTTTCAATTGTGTCTGAAGGCTCTACTTCCAAGGTGATAGTTTTTCCCGTTAAGGTC 577 Query 15160 TTTACAAAAATTTGCAT 15176 || |||||||||||||| Sbjct 578 TTCACAAAAATTTGCAT 594 >seq252373 Length=335 Score = 127 bits (140), Expect = 1e-24 Identities = 169/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||| | ||| | |||||||| | ||| | ||||| || || ||||||||| Sbjct 29 CCACCTTTAAGTCTGAGTACTAAATGTAAAGTACACTCTTTCTGAATATTGTAATCGGAC 88 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || ||| | | ||||| || ||||||||||| | ||||| ||||||||||| ||| Sbjct 89 AGTGTTCGCCCATCTTCCAACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGA 148 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| || || |||||| |||||| |||| || ||||| || || || Sbjct 149 ATTCCTTCTTTATCTTGAATTTTAGCCTTTACATTTTCAATGGTATCACTTGCCTCAACC 208 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAA 15184 |||| || || || || || |||| ||| || || ||||||||||| ||| || Sbjct 209 TCTAGAGTTATAGTCTTCCCAGTCAAAGTCTTAACGAAAATTTGCATGATTGCAA 263 >seq1656961 Length=2936 Score = 114 bits (126), Expect = 9e-21 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 14984 AATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGT 15043 || |||| || ||||||||||| ||| ||| | | ||||| | |||||| || ||| Sbjct 2615 AACCTTTCTGGATGTTGTAATCAGAGAGGGTTCGCCCATCTTCAAGTTGTTTTCCTGCGA 2674 Query 15044 ATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAA 15103 | || || | |||||||| || ||||||||||| || ||||||| ||||||| Sbjct 2675 AGATTAATCTTTGTTGGTCAGGAGGGATTCCTTCCTTATCTTGAATTTTGGCTTTTACAT 2734 Query 15104 TTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTA 15163 |||| |||||||| | || || || | |||||||||||||| || | ||||| | Sbjct 2735 TTTCAATAGTATCTGAAGCCTCAACTTCAAGAGTAATGGTTTTACCAGTTAACGTTTTAA 2794 Query 15164 CAAAAATTTGCAT 15176 |||| || ||||| Sbjct 2795 CAAAGATCTGCAT 2807 >seq1135619 Length=547 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| || || || ||||||||||| || || || ||||| |||||||| || || Sbjct 369 CCTCCTCTCAGCCTCAATACTAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCACTC 310 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | ||| || ||||| | ||||| | ||| ||||| ||| Sbjct 309 AGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 250 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| || || ||||| || ||| |||| || ||||| | ||| || Sbjct 249 ATTCCTTCTTTATCTTGGATTTTAGCCTTAACATTTTCAATTGTATCTGAAGGTTCAACT 190 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || ||||| || || || | ||||| ||||| ||||||||| Sbjct 189 TCAAGAGTGATGGTCTTTCCAGTTAAGGTTTTGACAAATATTTGCATA 142 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| |||||| | || || || || ||||| || ||||| |||||||||||||| Sbjct 141 CCTCCTCTCAATCTAAGTACCAAGTGGAGCGTAGATTCCTTTTGGATGTTGTAATCGCTA 82 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | ||| || ||||| | ||||| | ||| || ||| |||| Sbjct 81 AGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGATCGGGTGGA 22 Query 15070 ATTCCTTCCTTGTC 15083 || ||||| ||||| Sbjct 21 ATGCCTTCTTTGTC 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 350146024177460