Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq678478 111 1e-19 seq1488354 109 5e-19 seq1135619 96.9 3e-15 seq252373 95.1 1e-14 seq770237 91.5 1e-13 seq663341 89.7 5e-13 >seq678478 Length=406 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 || |||| || ||||| | || ||||||||||| || ||||| || | || || ||| Sbjct 216 AACCGCAGAACTAAATGGAGTGTGGACTCTTTTTGGATGTTGTAGTCACTCAATGTACGA 157 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 ||| ||||| || |||||||| | ||||||| ||| |||||||| || ||||| || Sbjct 156 CCATCTTCTAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCGGGTGGAATGCCTTCT 97 Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075 ||||| |||||| || | | || | ||||| | | || ||||||| ||| Sbjct 96 TTGTCTTGGATTTTAGCTTTTACATTCTCAATTGTGTCTGAAGCTTCAACTTCGAGGGTG 37 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGC 127111 | ||||| || || || ||||| || ||||| ||| Sbjct 36 ATTGTTTTTCCTGTAAGGGTTTTGACGAAAATTTGC 1 >seq1488354 Length=939 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | ||| || | ||| | ||||| || || || ||||||||||| ||||| | Sbjct 367 TCCACCTCTTAAACGAAGCACAAGATGTAATGTGGATTCCTTTTGAATATTATAATCACT 426 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||| | ||| ||||| ||||||||||| | || |||| ||| || || || || Sbjct 427 AAGCGTTCTGCCATCTTCTAGTTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGTGG 486 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 || ||||| || ||| ||| ||| ||| || | | ||| | ||||| | | ||| | Sbjct 487 AATACCCTCTTTATCC-TGAATTTTTGCTTTCACATTTTCAATTGTGTCTGAAGGCTCTA 545 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| | ||| | ||||| || || | || || |||||||| ||||| Sbjct 546 CTTCCAAGGTGATAGTTTTTCCCGTTAAGGTCTTCACAAAAATTTGCAT 594 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 126901 CAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATC 126960 |||||| ||||| | ||||| ||||||||||||||||| || | || || | ||| Sbjct 154 CAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTCAATGTTCTTCCATC 213 Query 126961 GTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 127020 || | ||||||||||| | || | | || || || || || || ||||| || || Sbjct 214 TTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGGAATACCCTCTTTATC 273 Query 127021 CGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCG 127079 | ||| ||| ||| |||| | ||| | |||||| | | || ||||| | || | | Sbjct 274 C-TGAATTTTTGCTTTGACATTTTCTATGGTGTCAGAAGGTTCTACTTCCAAAGTAATAG 332 Query 127080 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || || |||||||| |||||||| ||||| Sbjct 333 TTTTACCAGTTAGAGTTTTCACAAAAATTTGCAT 366 >seq1135619 Length=547 Score = 96.9 bits (106), Expect = 3e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | |||||| || ||||| || |||||||||| | |||||| ||| || Sbjct 123 ACCAAGTGGAGCGTAGATTCCTTTTGGATGTTGTAATCGCTAAGTGTGCGACCATCTTCA 64 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 127020 || || |||||||| | ||||||| |||||||||||| || ||||| || ||||| Sbjct 63 AGTTGCTTTCCAGCAAAAATCAATCTCTGCTGATCGGGTGGAATGCCTTCTTTGTC 8 >seq252373 Length=335 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 || ||||||| ||| ||||||| ||||||||||||||| || || || ||| || Sbjct 47 ACTAAATGTAAAGTACACTCTTTCTGAATATTGTAATCGGACAGTGTTCGCCCATCTTCC 106 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | |||||| ||||| ||||||||||||| || || || || || || || || || Sbjct 107 AACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATTCCTTCTTTATCTTGA 166 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 ||||| ||| | | ||| | ||| || | ||| || || | || | || || Sbjct 167 ATTTTAGCCTTTACATTTTCAATGGTATCACTTGCCTCAACCTCTAGAGTTATAGTCTTC 226 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || |||| ||| || || ||||| |||||| Sbjct 227 CCAGTCAAAGTCTTAACGAAAATTTGCATG 256 >seq770237 Length=425 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 126901 CAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATC 126960 |||||| ||||| | || || |||||||| |||||||| || | | || || ||| Sbjct 266 CAACACTAAATGCAGAGTGGATTCTTTTTGGATATTGTAGTCACTGAGAGTACGCCCATC 207 Query 126961 GTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 127020 || ||||||||||| || | ||||| | ||||| || || || || || || || | Sbjct 206 CTCAAGCTGTTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGTGGGATACCTTCTTTAT- 148 Query 127021 CGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCG 127079 | ||| | | || ||||| | ||| | || || | | ||| ||||| | || | | Sbjct 147 CTTGAATCTTTGCCTTGACATTTTCAATTGTATCTGAAGGCTCAACTTCTAGTGTTATGG 88 Query 127080 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || || |||| |||||| ||||| |||||||| Sbjct 87 TCTTCCCAGTCAAAGTTTTCACAAAGATCTGCAT 54 >seq663341 Length=403 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 || |||| || ||||| | || || |||||||| || ||||| || | || || ||| Sbjct 168 AACCGCAGAACTAAATGGAGTGTGGATTCTTTTTGGATGTTGTAGTCACTCAATGTACGA 109 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 ||| ||||| || |||||||| | || |||| |||||||||||| || ||||| || Sbjct 108 CCATCTTCTAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGATCGGGTGGAATGCCTTCT 49 Query 127016 TTGTCCGTGATTTT 127029 ||||| |||||| Sbjct 48 TTGTCTTGGATTTT 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 465613022389440