Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1488354 185 8e-42 seq770237 138 1e-27 seq1135619 125 6e-24 seq663341 123 2e-23 seq1656961 118 9e-22 seq678478 105 6e-18 seq1605470 100 3e-16 seq242576 100 3e-16 seq252373 96.9 3e-15 >seq1488354 Length=939 Score = 185 bits (204), Expect = 8e-42 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| | |||||||||||||| ||| || || ||||| ||||| ||||| || || || Sbjct 140 CCTCCCCTGAGCCTCAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTC 199 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | ||| |||||||||||||| || |||| | | ||| ||||| || ||| Sbjct 200 AATGTTCTTCCATCTTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGGA 259 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || |||||||| ||||||||| ||||| ||||| |||||| |||| || ||| Sbjct 260 ATACCCTCTTTATCCTGAATTTTTGCTTTGACATTTTCTATGGTGTCAGAAGGTTCTACT 319 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || | ||||| ||||| || ||||||||||| |||||||||||||| Sbjct 320 TCCAAAGTAATAGTTTTACCAGTTAGAGTTTTCACAAAAATTTGCAT 366 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| ||||| | || ||||||||||| ||||||||||| || | ||| | ||| || Sbjct 385 CACAAGATGTAATGTGGATTCCTTTTGAATATTATAATCACTAAGCGTTCTGCCATCTTC 444 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | ||||||||| || | || |||| || ||||| || ||||| || |||||||| || Sbjct 445 TAGTTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCCTCTTTATCCTG 504 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 ||||||| ||| | ||| | ||||| |||| ||| ||||| | || | ||||| Sbjct 505 AATTTTTGCTTTCACATTTTCAATTGTGTCTGAAGGCTCTACTTCCAAGGTGATAGTTTT 564 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || |||| || || |||||||||||||| Sbjct 565 TCCCGTTAAGGTCTTCACAAAAATTTGCAT 594 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | | || | || ||||| | || || ||||| || ||||| ||||| Sbjct 593 ATTCCTCCTCTTAATCTAAGAACAAGATGTAATGTAGACTCCTTCTGAATATTGTAATCA 652 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| | ||| ||||| ||||| ||||| | || | | ||| |||||||| Sbjct 653 CTTAATGTTCTCCCATCTTCCAACTGTTTCCCTGCAAAGATAAGCCTTTGTTGGTCCGGT 712 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||||||||| ||||||||| || | ||| | ||||| ||||| || Sbjct 713 GGGATACCTTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATAGTGTCTGAAGATTCT 772 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| | ||| | || || || |||| |||||| ||||| || |||||| Sbjct 773 ACTTCCAAAGTTATGGTCTTTCCAGTTAAAGTTTTGACAAAGATCTGCATC 823 >seq770237 Length=425 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184 ||||||||||| |||||| || ||||| ||||||||||| || || |||| || Sbjct 269 CCTCAACACTAAATGCAGAGTGGATTCTTTTTGGATATTGTAGTCACTGAGAGTACGCCC 210 Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| || | ||||||||||| | ||||| | ||||||||| || || || |||||||| Sbjct 209 ATCCTCAAGCTGTTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGTGGGATACCTTCTTT 150 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||||||| ||| |||| ||| | || || |||| ||| ||||| || || | Sbjct 149 ATCTTGAATCTTTGCCTTGACATTTTCAATTGTATCTGAAGGCTCAACTTCTAGTGTTAT 90 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | |||||| ||||| || ||||| Sbjct 89 GGTCTTCCCAGTCAAAGTTTTCACAAAGATCTGCAT 54 >seq1135619 Length=547 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 ||||||| | |||||||| |||| ||| || || || ||||||||||| || || || | Sbjct 371 TTCCTCCTCTCAGCCTCAATACTAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAC 312 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | | || | ||| || | ||| ||||| || | ||||||| |||||||| || | Sbjct 311 TCAGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGGTCTGGTG 252 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGA 45291 | || |||||||||||||| ||||| || | ||| | || || |||| || | Sbjct 251 GGATTCCTTCTTTATCTTGGATTTTAGCCTTAACATTTTCAATTGTATCTGAAGGTTCAA 192 Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||| ||||| | || || || |||| ||||| ||||| |||||||| Sbjct 191 CTTCAAGAGTGATGGTCTTTCCAGTTAAGGTTTTGACAAATATTTGCAT 143 Score = 89.7 bits (98), Expect = 5e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || ||||| |||||||||||||| || |||||||| | || | ||| || | ||| Sbjct 117 TGGAGCGTAGATTCCTTTTGGATGTTGTAATCGCTAAGTGTGCGACCATCTTCAAGTTGC 58 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 ||||| || | ||||||| ||||| || || |||||||||||||| ||||| ||| Sbjct 57 TTTCCAGCAAAAATCAATCTCTGCTGATCGGGTGGAATGCCTTCTTTGTCTTGGATT 1 >seq663341 Length=403 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184 ||||| |||| ||| || || ||||| || ||||||||||| || || | || | Sbjct 394 CCTCAGAACTAAATGGAGTGTGGATTCTTTCTGGATATTATAGTCACTAAGAGTACGACC 335 Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| || | ||| ||||| || | || |||| |||||||| || ||||| || ||||| Sbjct 334 ATCTTCAAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGGTCTGGTGGAATACCCTCTTT 275 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 |||||| |||||| ||| | ||| | ||||| || | || || || || |||| Sbjct 274 ATCTTGGATTTTTGCTTTTACATTTTCGATAGTGTCAGATGCTTCAACCTCTAGGGTAAT 215 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || |||||||| ||||| |||||||| Sbjct 214 AGTTTTCCCCGTAAGAGTTTTCACAAAGATTTGCAT 179 >seq1656961 Length=2936 Score = 118 bits (130), Expect = 9e-22 Identities = 142/192 (74%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 45151 CCTTT-TGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| ||||| || ||||| || |||| ||| || | ||||||||||||| | Sbjct 2617 CCTTTCTGGATGTTGTAATCAGAGAGGGTTCGCCCATCTTCAAGTTGTTTTCCTGCGAAG 2676 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 || |||| ||| ||||| || || || ||||| |||||||||||||| ||| | | Sbjct 2677 ATTAATCTTTGTTGGTCAGGAGGGATTCCTTCCTTATCTTGAATTTTGGCTTTTACATTT 2736 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 || | || || |||| ||| ||||| ||||||| ||||| || |||| ||||| ||| Sbjct 2737 TCAATAGTATCTGAAGCCTCAACTTCAAGAGTAATGGTTTTACCAGTTAACGTTTTAACA 2796 Query 45330 AAAATTTGCATC 45341 || || |||||| Sbjct 2797 AAGATCTGCATC 2808 >seq678478 Length=406 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| | | || || |||| ||| || || || || |||||||| || || || Sbjct 228 ATACCTCCTCTCAACCGCAGAACTAAATGGAGTGTGGACTCTTTTTGGATGTTGTAGTCA 169 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | || | ||| || | ||| ||||| || | ||||||| || || || || Sbjct 168 CTCAATGTACGACCATCTTCTAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCGGGT 109 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||||||||| ||||| ||||| ||| | || | ||||| |||| || Sbjct 108 GGAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTCTCAATTGTGTCTGAAGCTTCA 49 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGC 45338 |||||||| || | ||||| || || || ||||| || ||||||||| Sbjct 48 ACTTCGAGGGTGATTGTTTTTCCTGTAAGGGTTTTGACGAAAATTTGC 1 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| || | ||| ||||| || | || |||| |||||||| || ||||| || ||||| Sbjct 382 ATCTTCAAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGGTCTGGTGGAATACCCTCTTT 323 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 |||||| |||||| ||| | ||| | ||||| || | || || || || |||| Sbjct 322 ATCTTGGATTTTTGCTTTTACATTTTCGATAGTGTCAGATGCTTCAACCTCTAGGGTAAT 263 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || |||||||| ||||| |||||||| Sbjct 262 AGTTTTCCCCGTAAGAGTTTTCACAAAGATTTGCAT 227 >seq1605470 Length=1495 Score = 100 bits (110), Expect = 3e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 ||||||| | |||||||| |||| ||| || || || ||||||||||| || || || | Sbjct 156 TTCCTCCTCTCAGCCTCAATACTAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAC 97 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | | || | ||| || | ||| ||||| || | ||||||| |||||||| || | Sbjct 96 TCAGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGGTCTGGTG 37 Query 45232 GAATGCCTTCTTTATCTTGAATTTT 45256 | || |||||||||||||| ||||| Sbjct 36 GGATTCCTTCTTTATCTTGGATTTT 12 >seq242576 Length=334 Score = 100 bits (110), Expect = 3e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 45159 ATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGT 45218 ||||| ||||| || | ||| | ||| ||||| ||||| ||||| | || | | | Sbjct 2 ATATTGTAATCACTTAATGTTCTCCCATCTTCCAACTGTTTCCCTGCAAAGATAAGCCTT 61 Query 45219 TGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTG 45278 || |||||||| || || ||||||||||| ||||||||| || | ||| | ||| Sbjct 62 TGTTGGTCCGGTGGGATACCTTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATAGTG 121 Query 45279 TCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGC 45338 || || || || ||||| | ||| | || || || |||| |||||| ||||| || ||| Sbjct 122 TCTGACGATTCTACTTCCAAAGTTATGGTCTTTCCAGTTAAAGTTTTGACAAAGATCTGC 181 Query 45339 ATC 45341 ||| Sbjct 182 ATC 184 Score = 96.9 bits (106), Expect = 3e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| ||||| ||||| ||||| |||||||||||||| | ||| || ||| || Sbjct 203 ACAAGATGAAGCGTGGATTCTTTTTGTATATTATAATCGCTCAATGTTCTACCATCTTCA 262 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | |||||| || || |||| | | ||| || || || || || ||||||||||| ||| Sbjct 263 AGTTGTTTACCAGCAAATATAAGCCTTTGTTGATCTGGTGGGATACCTTCTTTATCCTGA 322 Query 45252 ATTTTT 45257 |||||| Sbjct 323 ATTTTT 328 >seq252373 Length=335 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189 |||| ||| | || | || || || ||||| |||||| ||| || || | ||| | Sbjct 47 ACTAAATGTAAAGTACACTCTTTCTGAATATTGTAATCG--GACAGTGTTCGCCCATCTT 104 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 |||| ||||| || || | |||||||| || ||||| || ||||| ||||||||||||| Sbjct 105 CCAACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATTCCTTCTTTATCTT 164 Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 ||||||| || | ||| | ||| || | ||| || || ||||| | || | Sbjct 165 GAATTTTAGCCTTTACATTTTCAATGGTATCACTTGCCTCAACCTCTAGAGTTATAGTCT 224 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || | ||| || || ||||||||||| Sbjct 225 TCCCAGTCAAAGTCTTAACGAAAATTTGCAT 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 442604042057760