Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1644865 167 2e-36 seq678478 118 1e-21 seq1135619 95.1 1e-14 seq663341 91.5 1e-13 >seq1644865 Length=2180 Score = 167 bits (184), Expect = 2e-36 Identities = 500/767 (65%), Gaps = 16/767 (2%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| ||||||||||||| || || | |||||||| ||||||||||| || || Sbjct 794 CATAACACCACATTTTTGATATTCACCTACTCTCTTCTCAAAGAAATTAGTTTTCCCTTC 735 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 | |||||| | ||| || || || || || | || |||||||| | | || Sbjct 734 GAGGGAAATATTCTCCATGAAGTCTAAAGGATTTTCAACTTTATAGTGCTT--TTCACAT 677 Query 132711 C--AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAA 132768 | | || | | || || ||||| || || || ||||| || ||| | ||| Sbjct 676 CCCAACTCTATTAAAAGTCTATCGGCGACAAATTCAATGTACTGTTTCATTAATGTACAA 617 Query 132769 TTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828 || | ||| | ||| || |||| || || || | || ||| || || | || Sbjct 616 TTCATTCCAATTAGAGCAACGGGCAATGCATCTGTTAAGAATTCTTGTTCAATTGAAACG 557 Query 132829 GCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAAC 132888 ||||| || | |||||| | || || || || | |||| |||||| ||| Sbjct 556 GCGTCTGTAATTATTTCCGTGACAGTTTCCTTACTAGGTTTATTAACCAGATGCTTAAAC 497 Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948 || ||||| || || ||| ||| | || || ||||| || || |||||||| || ||| Sbjct 496 ATTAAGCACGCGAAATCGGTATGAAGACCTTCATCCCTAGATATAAGTTCGTTACTAAAA 437 Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008 || | || ||||| || || | || ||||||||||| || || || ||| || Sbjct 436 GTAAGTCCTGGCATCAGTCCTCTCTTCTTGAGCCAAAAAATAGCAGCAAAAGATCCACTG 377 Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG 133068 || || | || || || | || || || || | | ||| || | | ||||||| Sbjct 376 AAAAATATCCCTTCAACAGAGGCAAACGCAACAACTCTTTCGGCGTAAGAAGCTTCTTCA 317 Query 133069 CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATG 133128 || | ||||| | | ||||| ||||| || | |||||| || || | ||||||||| Sbjct 316 TTGCCAATCCAACATAAAGCCCAGTCGGCTTTCTTTTTGACACATGGGAGAGTTTCGATG 257 Query 133129 GCGTTCAACAAACGGAGTTTC---TCTTC-CGAGGA--ACGCACGTAGGTGTCGATGAGG 133182 ||||| || ||||||| | ||| |||| | | ||||| ||||| || Sbjct 256 GCGTTAAA------GAGTTTCGTTTTTTCTTTAGGATCAGATATATAGGTATCGATCAGT 203 Query 133183 GTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGC 133242 ||||||||| ||| ||||| || || || || || ||||||||| ||| Sbjct 202 AAACTATACATTTCACTGTGAACGTTTTCGATCATAATCTGGAAACCGTAAAAGAACCTT 143 Query 133243 GCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCG 133302 || || || || | ||||| ||| | ||| |||| || |||||||| || || Sbjct 142 GCTTCAGGAACTTGAATCTCTTGGCAGAACCTCTCCACCAAGTTCTCGTTGACAATTCCA 83 Query 133303 TCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTC 133349 || || || || || ||||| || || ||||||||| || || Sbjct 82 TCCGATGCAGCAAAGAATGCCAGAACATGGGAGATGAAATGACGTTC 36 >seq678478 Length=406 Score = 118 bits (130), Expect = 1e-21 Identities = 161/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 38246 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305 |||||| ||||| ||||| || || || ||||| |||||| |||| || || || | || Sbjct 1 GCAAATTTTCGTCAAAACCCTTACAGGAAAAACAATCACCCTCGAAGTTGAAGCTTCAGA 60 Query 38306 CAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACA 38365 || | | | | |||| ||||||| |||||||| || ||||| |||| ||||| Sbjct 61 CACAATTGAGAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCACCCGATCAACA 120 Query 38366 GCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACAT 38425 | | | |||| || || || || || || || | || || | | ||||||||||| Sbjct 121 GAGATTGATTTTTGCTGGAAAGCAACTAGAAGATGGTCGTACATTGAGTGACTACAACAT 180 Query 38426 CCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| || | || || ||||| || ||||| |||||||| || Sbjct 181 CCAAAAAGAGTCCACACTCCATTTAGTTCTGCGGTTGAGAGGAGG 225 >seq1135619 Length=547 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||| || ||||| | || || || |||||||| | || || || | | Sbjct 143 ATGCAAATATTTGTCAAAACCTTAACTGGAAAGACCATCACTCTTGAAGTTGAACCTTCA 202 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | ||| |||| | ||||||| || ||||| ||||| || | ||||| Sbjct 203 GATACAATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGAATCCCACCAGACCAG 262 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | | |||| || || || || || || || | ||||| || | ||||||||| Sbjct 263 CAGAGATTGATTTTTGCTGGAAAGCAACTTGAAGATGGTCGCACACTGAGTGACTACAAC 322 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| | || || ||||| || || | ||||||| || Sbjct 323 ATCCAAAAGGAGTCCACTCTTCATTTAGTATTGAGGCTGAGAGGAGG 369 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 38330 AATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACA 38389 ||||| |||||||| || ||||| |||| || ||| | | |||| || || || || Sbjct 1 AATCCAAGACAAAGAAGGCATTCCACCCGATCAGCAGAGATTGATTTTTGCTGGAAAGCA 60 Query 38390 GCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTT 38449 || || || | ||||| || | ||| |||||||||||||||||| | ||||| || || Sbjct 61 ACTTGAAGATGGTCGCACACTTAGCGATTACAACATCCAAAAGGAATCTACGCTCCACTT 120 Query 38450 GGTGCTGCGTTTGAGAGGCGG 38470 ||| || | |||||||| || Sbjct 121 GGTACTTAGATTGAGAGGAGG 141 >seq663341 Length=403 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 38322 AAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCG 38381 |||| ||||||| |||||||| || ||||| |||| || ||| | | |||| || Sbjct 29 AAAGCTAAAATCCAAGACAAAGAAGGCATTCCACCCGATCAGCAGAGATTAATTTTTGCT 88 Query 38382 GGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACG 38441 || || || || || || | || || | | ||||||||||||||||| ||| | || Sbjct 89 GGAAAGCAACTAGAAGATGGTCGTACATTGAGTGACTACAACATCCAAAAAGAATCCACA 148 Query 38442 CTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || ||||| || ||||| |||||||| ||| Sbjct 149 CTCCATTTAGTTCTGCGGTTGAGAGGAGGC 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 489771981719040