Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1488354 161 2e-34 seq770237 152 1e-31 seq252373 152 1e-31 seq1135619 143 6e-29 seq678478 138 2e-27 seq242576 136 9e-27 seq1656961 131 4e-25 seq1605470 96.9 8e-15 seq663341 86.0 1e-11 >seq1488354 Length=939 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | |||||| || | || ||||| || |||||||||||||| | || Sbjct 601 TCTTAATCTAAGAACAAGATGTAATGTAGACTCCTTCTGAATATTGTAATCACTTAATGT 660 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 |||||||||||| | ||| || ||||| |||||||| | ||||||||| || || || || Sbjct 661 TCTCCCATCTTCCAACTGTTTCCCTGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATACC 720 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| || ||||||||| ||| || || ||||| ||||| ||| ||| ||||| | Sbjct 721 TTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATAGTGTCTGAAGATTCTACTTCCAA 780 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | |||||||| || |||||||| || || | ||||| Sbjct 781 AGTTATGGTCTTTCCAGTTAAAGTTTTGACAAAGATCTGCAT 822 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||| ||||| || | ||||| || || ||||||||||||||||| || | ||| Sbjct 146 CTGAGCCTCAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTCAATGTT 205 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 || |||||||| | || || || || || ||||| | |||||||||||| ||||| || Sbjct 206 CTTCCATCTTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGGAATACCC 265 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099 ||||| || ||||||||| ||||| || || |||||||| ||| ||| ||||| | Sbjct 266 TCTTTATCCTGAATTTTTGCTTTGACATTTTCTATGGTGTCAGAAGGTTCTACTTCCAAA 325 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| || || || || | |||||| || || | ||||||| Sbjct 326 GTAATAGTTTTACCAGTTAGAGTTTTCACAAAAATTTGCATT 367 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || | ||||| || ||||||||||| ||||| ||| ||||| |||||||| Sbjct 386 ACAAGATGTAATGTGGATTCCTTTTGAATATTATAATCACTAAGCGTTCTGCCATCTTCT 445 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || || || || || | || ||||||||||| ||||| || ||||| || ||| Sbjct 446 AGTTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCCTCTTTATCCTGA 505 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 |||||| || || || ||||| ||||| ||| || ||||| | ||| | || ||| Sbjct 506 ATTTTTGCTTTCACATTTTCAATTGTGTCTGAAGGCTCTACTTCCAAGGTGATAGTTTTT 565 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || || || || || | ||||||| Sbjct 566 CCCGTTAAGGTCTTCACAAAAATTTGCATT 595 >seq770237 Length=425 Score = 152 bits (168), Expect = 1e-31 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 ||||| || | || |||||||| |||||||| |||||||| || ||||| | |||| Sbjct 268 CTCAACACTAAATGCAGAGTGGATTCTTTTTGGATATTGTAGTCACTGAGAGTACGCCCA 209 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 || || ||||| || ||||| || || | | ||| |||||||| || || |||||||| Sbjct 208 TCCTCAAGCTGTTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGTGGGATACCTTCTTTA 149 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 |||||||| ||| |||||| || ||||| || || ||| || ||||| || || | Sbjct 148 TCTTGAATCTTTGCCTTGACATTTTCAATTGTATCTGAAGGCTCAACTTCTAGTGTTATG 89 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 ||||| || ||||||||||| || || | ||||||| Sbjct 88 GTCTTCCCAGTCAAAGTTTTCACAAAGATCTGCATTT 52 Score = 111 bits (122), Expect = 3e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || || || | || || || || || |||||||||||||||||||| ||||| Sbjct 425 CTTTCCAGCAAAAATTAATCTCTGCTGATCGGGTGGAATGCCTTCTTTGTCTTGGATTTT 366 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || |||||||| ||||| || ||| ||||||||||| | ||||| || || Sbjct 365 AGCCTTAACATTCTCAATCGTGTCTGATGCTTCAACTTCAAGGGTGATGGTCTTACCAGT 306 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||||||||| || || | |||||| Sbjct 305 CAAAGTTTTCACAAAGATTTGCAT 282 >seq252373 Length=335 Score = 152 bits (168), Expect = 1e-31 Identities = 152/196 (78%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 194948 ACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGA 195007 ||||||| |||||||||||||||| || |||| ||||||||| | ||| || || || | Sbjct 63 ACTCTTTCTGAATATTGTAATCGGACAGTGTTCGCCCATCTTCCAACTGTTTGCCAGCAA 122 Query 195008 AGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGT 195067 |||| | ||| |||||||| || ||||| |||||||| ||||||||||| ||| || | Sbjct 123 AGATCAATCGCTGTTGGTCAGGGGGAATTCCTTCTTTATCTTGAATTTTAGCCTTTACAT 182 Query 195068 TCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTT 195124 | |||||||| || |||| || || || || || | ||||| || |||||||| | Sbjct 183 TTTCAATGGTATC---ACTTGCCTCAACCTCTAGAGTTATAGTCTTCCCAGTCAAAGTCT 239 Query 195125 TTACGAACACTTGCAT 195140 | ||||| | |||||| Sbjct 240 TAACGAAAATTTGCAT 255 >seq1135619 Length=547 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || ||||| || | |||||||||||||| ||||| || ||||| || || || Sbjct 364 TCTCAGCCTCAATACTAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCACTCAGTGT 305 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| || ||||| || || || || | || || |||||||| || || || Sbjct 304 GCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATTCC 245 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||| ||||| ||| || || ||||| || || ||| ||| |||||||| Sbjct 244 TTCTTTATCTTGGATTTTAGCCTTAACATTTTCAATTGTATCTGAAGGTTCAACTTCAAG 185 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | |||||||| || || ||||| || || | |||||| Sbjct 184 AGTGATGGTCTTTCCAGTTAAGGTTTTGACAAATATTTGCAT 143 Score = 87.8 bits (96), Expect = 4e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | || | ||| || || || || ||||| || ||||||||| ||| || Sbjct 136 TCTCAATCTAAGTACCAAGTGGAGCGTAGATTCCTTTTGGATGTTGTAATCGCTAAGTGT 77 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| || ||||| || || || || | || || || || || |||||||| Sbjct 76 GCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGATCGGGTGGAATGCC 17 Query 195039 TTCTTTGTCTTGAATT 195054 |||||||||||| ||| Sbjct 16 TTCTTTGTCTTGGATT 1 >seq678478 Length=406 Score = 138 bits (152), Expect = 2e-27 Identities = 151/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || |||||||||||||| || ||||| || | || | |||||||| || ||| Sbjct 201 TGGAGTGTGGACTCTTTTTGGATGTTGTAGTCACTCAATGTACGACCATCTTCTAGTTGC 142 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || || || | || ||||| || || |||||||||||||||||||| ||||| Sbjct 141 TTTCCAGCAAAAATCAATCTCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATTTTA 82 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || || |||||||| ||||| ||| ||| ||||| ||||| | || |||||||| Sbjct 81 GCTTTTACATTCTCAATTGTGTCTGAAGCTTCAACTTCGAGGGTGATTGTTTTTCCTGTA 22 Query 195118 AAAGTTTTTACGAACACTTGC 195138 | ||||| ||||| | |||| Sbjct 21 AGGGTTTTGACGAAAATTTGC 1 >seq242576 Length=334 Score = 136 bits (150), Expect = 9e-27 Identities = 140/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 194958 AATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCG 195017 |||||||||||| | |||||||||||||| | ||| || ||||| |||||||| | Sbjct 1 AATATTGTAATCACTTAATGTTCTCCCATCTTCCAACTGTTTCCCTGCAAAGATAAGCCT 60 Query 195018 TTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGT 195077 ||||||||| || || || |||||||| || ||||||||| ||| || || ||||| || Sbjct 61 TTGTTGGTCCGGTGGGATACCTTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATAGT 120 Query 195078 GTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTG 195137 ||| || ||| ||||| | || | |||||||| || |||||||| || || | || Sbjct 121 GTCTGACGATTCTACTTCCAAAGTTATGGTCTTTCCAGTTAAAGTTTTGACAAAGATCTG 180 Query 195138 CAT 195140 ||| Sbjct 181 CAT 183 >seq1656961 Length=2936 Score = 131 bits (144), Expect = 4e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||| || || |||||||| | || |||| ||||||||| || || || |||||||||| Sbjct 2618 CTTTCTGGATGTTGTAATCAGAGAGGGTTCGCCCATCTTCAAGTTGTTTTCCTGCGAAGA 2677 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | || ||||||||| ||||| || ||||| || ||||||||||| || || || | Sbjct 2678 TTAATCTTTGTTGGTCAGGAGGGATTCCTTCCTTATCTTGAATTTTGGCTTTTACATTTT 2737 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 |||| || || ||| || |||||||| |||| || || || || || ||||| || | Sbjct 2738 CAATAGTATCTGAAGCCTCAACTTCAAGAGTAATGGTTTTACCAGTTAACGTTTTAACAA 2797 Query 195131 ACACTTGCAT 195140 | | ||||| Sbjct 2798 AGATCTGCAT 2807 >seq1605470 Length=1495 Score = 96.9 bits (106), Expect = 8e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || ||||| || | |||||||||||||| ||||| || ||||| || || || Sbjct 149 TCTCAGCCTCAATACTAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCACTCAGTGT 90 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| || ||||| || || || || | || || |||||||| || || || Sbjct 89 GCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATTCC 30 Query 195039 TTCTTTGTCTTGAATTTT 195056 |||||| ||||| ||||| Sbjct 29 TTCTTTATCTTGGATTTT 12 >seq663341 Length=403 Score = 86.0 bits (94), Expect = 1e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || ||||| |||||||| || ||||| || | || | |||||||| || ||| Sbjct 153 TGGAGTGTGGATTCTTTTTGGATGTTGTAGTCACTCAATGTACGACCATCTTCTAGTTGC 94 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || || || | || || || || || |||||||||||||||||||| ||||| Sbjct 93 TTTCCAGCAAAAATTAATCTCTGCTGATCGGGTGGAATGCCTTCTTTGTCTTGGATTTTA 34 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAA 195084 || || || || || ||||| ||| Sbjct 33 GCTTTTACATTTTCGATAGTGTCTGAA 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1085833763851452