Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1644865 250 3e-61 >seq1644865 Length=2180 Score = 250 bits (276), Expect = 3e-61 Identities = 541/799 (68%), Gaps = 28/799 (4%) Strand=Plus/Minus Query 36871 TCATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCT 36929 ||||||| || |||||||||||| || |||| |||| || || ||||| || || ||| Sbjct 795 TCATAACACCACATTTTTGATATTCACCTACTC-TCTTCTCAAAGAAATTAGTTTTCCCT 737 Query 36930 TCTAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACT---- 36985 || || || ||||| ||||| || || || ||||| | | |||||| || Sbjct 736 TCGAGGGAAATATTCTCCATGAAGTCTAAAGGATTT----TCAACTTTATAGTGCTTTTC 681 Query 36986 ACATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTC 37045 |||| || || | | ||| ||||| || |||||||| ||||| | ||||| | Sbjct 680 ACATCCCAACTCTATTAAAAGTCTATCGGCGACAAATTCAATGTACTGTTTCATTAATGT 621 Query 37046 ATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTA 37104 | | || || |||||||| || || | ||||||| | ||||| | || ||| ||| Sbjct 620 ACAATTCATTCCAATTAGAGCAACGGGCAATGCATCTGTTAAGAATTC-TTGTTCAATTG 562 Query 37105 TTACAGCATCTTTAACTATAT---TAACAATAACTTCTTCAGTTGGGGGATATTTTAA-- 37159 || || ||| ||| ||| | | ||| | ||| | | | || | | |||| Sbjct 561 AAACGGCGTCTGTAATTATTTCCGTGACAGT---TTCCTTACTAGG----TTTATTAACC 509 Query 37160 --ATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAAT 37217 || ||||||| ||| || || ||||| ||| | ||||||||| ||| ||| | | Sbjct 508 AGATGCTTAAACATTAAGCACGCGAAATCGGTATGAAGACCTTCATCCCTAGATATAAGT 449 Query 37218 TCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCA 37277 || ||| ||| || | ||||||||| | ||||| || || | |||||| || || ||| Sbjct 448 TCGTTACTAAAAGTAAGTCCTGGCATCAGTCCTCTCTTCTTGAGCCAAAAAATAGCAGCA 389 Query 37278 AAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAA 37337 ||||||||| || || || |||||||| | ||||| || |||| | | || || Sbjct 388 AAAGATCCACTGAAAAATATCCCTTCAACAGAGGCAAACGCAACAACTCTTTCGGCGTAA 329 Query 37338 GTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCA 37397 | | | || |||||| | | ||| || || || ||| |||||| Sbjct 328 GAAGCTTCTTCATTGCCAATCCAACATAAAGCCCAGTCGGCTTTCTTTTTGACACATGGG 269 Query 37398 ATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCA 37457 | ||||| || || || ||||| ||||||||| | ||| | |||||| ||||| Sbjct 268 AGAGTTTCGATGGCGTTAAAGAGTTTCGTTTTTTCTTTAGGATCAGATATATAGGTATCG 209 Query 37458 ATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAA 37517 || |||||||||||||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct 208 ATCAGTAAACTATACATTTCACTGTGAACGTTTTCGATCATAATCTGGAAACCGTAAAAG 149 Query 37518 CACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACT 37577 |||| ||||||| | ||||| || | | ||||||| | ||||| || || || Sbjct 148 AACCTTGCTTCAGGAACTTGAATCTCTTGGCAGAACCTCTCCACCAAGTTCTCGTTGACA 89 Query 37578 ATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATC-ATT 37636 || ||||| || |||||||| || ||||||| || ||||| | |||||| Sbjct 88 ATTCCATCCGATGCAGCAAAGAATGCCAGAACATGGGAGATGAAATGACGTTCATCTGGC 29 Query 37637 TGATAATTTTTTCCAATCA 37655 ||| | ||| ||||||||| Sbjct 28 TGA-AGTTTGTTCCAATCA 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579999897918240