Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1644865 118 2e-21 seq1252977 87.8 3e-12 >seq1644865 Length=2180 Score = 118 bits (130), Expect = 2e-21 Identities = 267/399 (67%), Gaps = 2/399 (1%) Strand=Plus/Minus Query 48188 AGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAG 48247 || || ||||| | || |||| |||||||| ||||| || || ||||| ||| ||| Sbjct 433 AGTCCTGGCATCAGTCCTCTCTTCTTGAGCCAAAAAATAGCAGCAAAAGATCCACTGAAA 374 Query 48248 AAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCT 48307 || || || || || | || ||||| | || || || ||||||| ||||| | Sbjct 373 AATATCCCTTCAACAGAGGCAAACGCAACAACTCTTTCGGCGTAAGAAGC-TTCTTCATT 315 Query 48308 GAGA-TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 | | |||| | | |||||||| || ||||| |||| ||||| | || || ||||| Sbjct 314 GCCAATCCAACATAAAGCCCAGTCGGCTTTCTTTTTGACACATGGGAGAGTTTCGATGGC 255 Query 48367 CCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTA 48426 ||||| ||| | || | || | | ||||||| || ||| || Sbjct 254 GTTAAAGAGTTTCGTTTTTTCTTTAGGATCAGATATATAGGTATCGATCAGTAAACTATA 195 Query 48427 CATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAA 48486 ||| ||| ||| || || || || |||||||| ||||| ||| ||| || ||| Sbjct 194 CATTTCACTGTGAACGTTTTCGATCATAATCTGGAAACCGTAAAAGAACCTTGCTTCAGG 135 Query 48487 CACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGC 48546 || || | ||| | |||| ||||||| || ||||| ||||| || ||||| || || Sbjct 134 AACTTGAATCTCTTGGCAGAACCTCTCCACCAAGTTCTCGTTGACAATTCCATCCGATGC 75 Query 48547 AGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTC 48585 ||||||||| || || ||||| | |||||| || || Sbjct 74 AGCAAAGAATGCCAGAACATGGGAGATGAAATGACGTTC 36 >seq1252977 Length=617 Score = 87.8 bits (96), Expect = 3e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 ||| || || || ||||| || | |||| ||| | ||| |||||||| | |||||||| Sbjct 253 CTGAAATTCTCCGGAGAGGACACGCCTCGAGTAGATGTTGGAAGTGTAAGCTTCGATGCT 194 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||| || ||||| || ||||| || ||| || || ||||| || || | |||||| Sbjct 193 CTCATTATTCCCGAGGATCTGCGCGGTGGAAGCGGTTGGCATTGGGGCAATCAGGAGCGA 134 Query 213038 GTTCCTCACTCCG 213050 ||||||||| ||| Sbjct 133 GTTCCTCACCCCG 121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 912162087767040