Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq1488354 120 3e-22 seq1135619 95.1 1e-14 >seq1488354 Length=939 Score = 120 bits (132), Expect = 3e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| ||||| |||| |||||||| ||||| ||| |||||||| Sbjct 367 AATGCAAATTTTTGTGAAAACTCTAACTGGTAAAACTATTACTTTGGAAGTAGAACCTTC 308 Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 || || | | || |||| ||||||| || || |||||||| | || ||| | Sbjct 307 TGACACCATAGAAAATGTCAAAGCAAAAATTCAG-GATAAAGAGGGTATTCCACCAGACC 249 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 |||| || ||||| ||||| || ||||||||||||||| | ||| || || || | Sbjct 248 AACAAAGGCTTATATTTGCTGGAAAACAATTGGAAGATGGAAGAACATTGAGTGACTACA 189 Query 28732 ACATTCAAAAAGAATCTACTCTGCA 28756 | ||||||||||||||||| || || Sbjct 188 ATATTCAAAAAGAATCTACCCTTCA 164 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| ||||| || || ||||| || ||| ||| ||||| Sbjct 822 ATGCAGATCTTTGTCAAAACTTTAACTGGAAAGACCATAACTTTGGAAGTAGAATCTTCA 763 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| |||||| || ||||| || | || || ||| Sbjct 762 GACACTATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCGGACCAA 703 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || || ||||||||||| || ||||| ||||||||| | ||| | ||||| || Sbjct 702 CAAAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGAGAACATTAAGTGATTACAAT 643 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| || || ||||| | || | || | |||||| ||||||| || Sbjct 642 ATTCAGAAGGAGTCTACATTACATCTTGTTCTTAGATTAAGAGGAGGAAT 593 >seq1135619 Length=547 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| ||||| ||||| || || ||||| || ||| ||||||||| Sbjct 143 ATGCAAATATTTGTCAAAACCTTAACTGGAAAGACCATCACTCTTGAAGTTGAACCTTCA 202 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| |||||| || ||||| ||| | || ||| || Sbjct 203 GATACAATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGAATCCCACCAGACCAG 262 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | || ||||| || || ||| | |||||| | || || || || ||| Sbjct 263 CAGAGATTGATTTTTGCTGGAAAGCAACTTGAAGATGGTCGCACACTGAGTGACTACAAC 322 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 || ||||| || || ||||| || | ||||| || | ||||||| Sbjct 323 ATCCAAAAGGAGTCCACTCTTCATTTAGTATTGAGGCTGAGAGGAGG 369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 416779892627724