Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1488354 172 1e-37 seq678478 156 7e-33 seq252373 150 3e-31 seq663341 143 5e-29 seq1135619 138 2e-27 seq770237 125 1e-23 seq242576 109 1e-18 seq123891 107 3e-18 seq1626314 86.0 1e-11 >seq1488354 Length=939 Score = 172 bits (190), Expect = 1e-37 Identities = 181/238 (76%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||| || ||||| || ||||| ||||| | || || |||||| Sbjct 358 AATTTGCATTCCACCTCTTAAACGAAGCACAAGATGTAATGTGGATTCCTTTTGAATATT 417 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || | |||||| ||| |||| ||||||||| |||||||||||||||||||| Sbjct 418 ATAATCACTAAGCGTTCTGCCATCTTCTAGTTGTTTTCCAGCAAAAATTAATCTCTGTTG 477 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || || || |||||||| || ||||| | ||| | |||| ||| || || || Sbjct 478 GTCTGGTGGAATACCCTCTTTATCCTGAATTTTTGCTTTCACATTTTCAATTGTGTCTGA 537 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 || ||| ||||| | || |||||||| || |||| || || ||||| ||||||||| Sbjct 538 AGGCTCTACTTCCAAGGTGATAGTTTTTCCCGTTAAGGTCTTCACAAAAATTTGCATT 595 Score = 149 bits (164), Expect = 1e-30 Identities = 175/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || ||||| |||| ||| || ||||| ||||||| ||| || |||||| Sbjct 586 AATTTGCATTCCTCCTCTTAATCTAAGAACAAGATGTAATGTAGACTCCTTCTGAATATT 645 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || ||| ||||| ||| || || ||||| || ||||| || | || ||||| Sbjct 646 GTAATCACTTAATGTTCTCCCATCTTCCAACTGTTTCCCTGCAAAGATAAGCCTTTGTTG 705 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || || ||||||||||| || ||||| | || | |||| |||||| || || Sbjct 706 GTCCGGTGGGATACCTTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATAGTGTCTGA 765 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 ||| || ||||| | |||||| || || || |||| ||||| ||||| || ||||| Sbjct 766 AGATTCTACTTCCAAAGTTATGGTCTTTCCAGTTAAAGTTTTGACAAAGATCTGCAT 822 Score = 132 bits (146), Expect = 8e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 193164 GTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCG 193223 |||| ||||| |||||| ||||| || ||||| ||| || ||||||||||| Sbjct 170 GTAGATTCTTTTTGAATATTGTAGTCACTCAATGTTCTTCCATCTTCCAATTGTTTTCCA 229 Query 193224 GCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTT 193283 ||||| || | || ||||| || || || || || |||||||| || ||||| | ||| Sbjct 230 GCAAATATAAGCCTTTGTTGGTCTGGTGGAATACCCTCTTTATCCTGAATTTTTGCTTTG 289 Query 193284 ATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtt 193343 | |||| || || || |||| || ||||| | ||| ||||||||||| ||||| ||| Sbjct 290 ACATTTTCTATGGTGTCAGAAGGTTCTACTTCCAAAGTAATAGTTTTACCAGTTAGAGTT 349 Query 193344 tttacaaatatttgcatt 193361 || ||||| ||||||||| Sbjct 350 TTCACAAAAATTTGCATT 367 >seq678478 Length=406 Score = 156 bits (172), Expect = 7e-33 Identities = 175/234 (75%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| |||||||| || || || | ||| | ||| | |||||| || || Sbjct 234 ATTTGCATACCTCCTCTCAACCGCAGAACTAAATGGAGTGTGGACTCTTTTTGGATGTTG 175 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || || | | ||| |||| ||| ||||| |||||||| |||||||||||| Sbjct 174 TAGTCACTCAATGTACGACCATCTTCTAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGA 115 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || |||||||| ||||| ||||| | ||||| ||| ||| || || ||| Sbjct 114 TCGGGTGGAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTCTCAATTGTGTCTGAA 55 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgc 193358 | |||||||| || || || ||||| ||||| || ||||| || || |||||| Sbjct 54 GCTTCAACTTCGAGGGTGATTGTTTTTCCTGTAAGGGTTTTGACGAAAATTTGC 1 Score = 132 bits (146), Expect = 8e-26 Identities = 123/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || | ||| ||||| ||||||||||||||||| || || || || || || ||||| Sbjct 382 ATCTTCAAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGGTCTGGTGGAATACCCTCTTT 323 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 |||||| ||||| | ||||| |||| ||||| || || | ||||| ||||| || || Sbjct 322 ATCTTGGATTTTTGCTTTTACATTTTCGATAGTGTCAGATGCTTCAACCTCTAGGGTAAT 263 Query 193325 AGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 |||||| || || || ||||| ||||| |||||||| Sbjct 262 AGTTTTCCCCGTAAGAGTTTTCACAAAGATTTGCAT 227 >seq252373 Length=335 Score = 150 bits (166), Expect = 3e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||||||| | | || ||||| | ||| || ||| |||||| |||||| || ||||| Sbjct 28 ACCACCTTTAAGTCTGAGTACTAAATGTAAAGTACACTCTTTCTGAATATTGTAATCGGA 87 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | |||| ||| || || ||||| || ||||| || |||| |||||| ||||| || Sbjct 88 CAGTGTTCGCCCATCTTCCAACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGG 147 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 ||||||||||||||||| ||||| | |||| |||| ||| ||||| | |||||| Sbjct 148 AATTCCTTCTTTATCTTGAATTTTAGCCTTTACATTTTCAATGGTATCACTTGCCTCAAC 207 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 |||||||||||||| || || || | || || || || |||||||| Sbjct 208 CTCTAGAGTTATAGTCTTCCCAGTCAAAGTCTTAACGAAAATTTGCAT 255 >seq663341 Length=403 Score = 143 bits (158), Expect = 5e-29 Identities = 166/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 193137 CCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAAC 193196 |||||||| | || || | ||| | ||| | ||||| ||||||||||| | Sbjct 402 CCTCTCAACCTCAGAACTAAATGGAGTGTGGATTCTTTCTGGATATTATAGTCACTAAGA 343 Query 193197 GTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATT 193256 || | | ||| || | ||| ||||| ||||||||||||||||| || || || || || Sbjct 342 GTACGACCATCTTCAAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGGTCTGGTGGAATA 283 Query 193257 CCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCT 193316 || ||||||||||| ||||| | ||||| |||| ||||| || || | ||||| ||| Sbjct 282 CCCTCTTTATCTTGGATTTTTGCTTTTACATTTTCGATAGTGTCAGATGCTTCAACCTCT 223 Query 193317 AGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 || || |||||||| || || || ||||| ||||| |||||||| Sbjct 222 AGGGTAATAGTTTTCCCCGTAAGAGTTTTCACAAAGATTTGCAT 179 Score = 111 bits (122), Expect = 3e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || || |||||||| || || || | ||| | ||| | ||||| || || Sbjct 186 ATTTGCATGCCTCCTCTCAACCGCAGAACTAAATGGAGTGTGGATTCTTTTTGGATGTTG 127 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || || | | ||| |||| ||| ||||| ||||||||||||||||| ||| Sbjct 126 TAGTCACTCAATGTACGACCATCTTCTAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGA 67 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || |||||||| ||||| ||||| | ||||| |||| ||||| || ||| Sbjct 66 TCGGGTGGAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCGATAGTGTCTGAA 7 Query 193305 G 193305 | Sbjct 6 G 6 >seq1135619 Length=547 Score = 138 bits (152), Expect = 2e-27 Identities = 124/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || | ||| ||||| |||||||| |||||||| || || || || ||||||||||| Sbjct 298 ATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATTCCTTCTTT 239 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 |||||| ||||| | || | |||| ||| ||||| |||| |||||||| ||||| || Sbjct 238 ATCTTGGATTTTAGCCTTAACATTTTCAATTGTATCTGAAGGTTCAACTTCAAGAGTGAT 179 Query 193325 AGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 || || || |||| ||||| |||||||||||||| Sbjct 178 GGTCTTTCCAGTTAAGGTTTTGACAAATATTTGCAT 143 >seq770237 Length=425 Score = 125 bits (138), Expect = 1e-23 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| |||||||| | | || | ||||| || | ||||| ||||| Sbjct 289 ATTTGCATACCCCCTCTCAACCTCAACACTAAATGCAGAGTGGATTCTTTTTGGATATTG 230 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| | || | ||| || | |||||||| |||||||| || || || || Sbjct 229 TAGTCACTGAGAGTACGCCCATCCTCAAGCTGTTTTCCTGCAAAAATCAACCTTTGCTGG 170 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || |||||||||||||| || || | || | |||| ||| ||||| ||| Sbjct 169 TCTGGTGGGATACCTTCTTTATCTTGAATCTTTGCCTTGACATTTTCAATTGTATCTGAA 110 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatttt 193363 | |||||||||||| ||||| || || || || | ||||| ||||| || |||||||| Sbjct 109 GGCTCAACTTCTAGTGTTATGGTCTTCCCAGTCAAAGTTTTCACAAAGATCTGCATTTT 51 Score = 109 bits (120), Expect = 1e-18 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 193218 TTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTG 193277 ||||| ||||||||||||||||| ||||| || || || |||||||| ||||| ||||| Sbjct 424 TTTCCAGCAAAAATTAATCTCTGCTGATCGGGTGGAATGCCTTCTTTGTCTTGGATTTTA 365 Query 193278 GTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTT 193337 | || | ||| ||| || || || | |||||||| || || || || ||||| || Sbjct 364 GCCTTAACATTCTCAATCGTGTCTGATGCTTCAACTTCAAGGGTGATGGTCTTACCAGTC 305 Query 193338 AGCGtttttacaaatatttgcat 193360 | ||||| ||||| |||||||| Sbjct 304 AAAGTTTTCACAAAGATTTGCAT 282 >seq242576 Length=334 Score = 109 bits (120), Expect = 1e-18 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||| || || ||| ||||| ||| || || ||||| || ||||| || | || Sbjct 1 AATATTGTAATCACTTAATGTTCTCCCATCTTCCAACTGTTTCCCTGCAAAGATAAGCCT 60 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||||| || || || || ||||||||||| || ||||| | || | |||| |||||| Sbjct 61 TTGTTGGTCCGGTGGGATACCTTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATAGT 120 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttg 193357 || || || || ||||| | |||||| || || || |||| ||||| ||||| || || Sbjct 121 GTCTGACGATTCTACTTCCAAAGTTATGGTCTTTCCAGTTAAAGTTTTGACAAAGATCTG 180 Query 193358 cat 193360 ||| Sbjct 181 CAT 183 Score = 87.8 bits (96), Expect = 3e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || || ||||| ||||| || ||||| | || | ||||| |||||||| ||| Sbjct 182 ATCCCTCCCCTCAACCGAAGAACAAGATGAAGCGTGGATTCTTTTTGTATATTATAATCG 241 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || |||||| ||| || | |||||| || ||||| || | || |||||||| || Sbjct 242 CTCAATGTTCTACCATCTTCAAGTTGTTTACCAGCAAATATAAGCCTTTGTTGATCTGGT 301 Query 193251 GGTATTCCTTCTTTATCTTGTATTTT 193276 || || ||||||||||| || ||||| Sbjct 302 GGGATACCTTCTTTATCCTGAATTTT 327 >seq123891 Length=317 Score = 107 bits (118), Expect = 3e-18 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280 || ||||| || | || |||||||| || || || ||||||||||| || ||||| | Sbjct 1 CCAGCAAATATAAGCCTTTGTTGATCTGGTGGGATACCTTCTTTATCCTGAATTTTTGCC 60 Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340 |||| |||| ||| ||||| |||| || || || | ||||||||||||||| || | Sbjct 61 TTTACATTTTCAATGGTATCAGAAGGTTCTACCTCCAAAGTTATAGTTTTACCAGTCAAT 120 Query 193341 Gtttttacaaatatttgcat-tttatta----gtaaaataattattttaaataatatata 193395 || |||||||| || ||||| | | || |||| | ||||||| |||| || || | Sbjct 121 GTCTTTACAAAAATCTGCATCTGAAATACAATTTAAAGTTATTATTTCAAATTATTTAAA 180 Query 193396 ctttatatt-ttaa 193408 ||| ||| |||| Sbjct 181 ATTTTAATTATTAA 194 >seq1626314 Length=1748 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 193257 CCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCT 193316 |||||||| ||||||||||||| || | |||| || || || || | |||||| || Sbjct 264 CCTTCTTTGTCTTGTATTTTGGCCTTGACATTTTCTATTGTGTCAGAGGCCTCAACCTCA 205 Query 193317 AGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatttt 193363 |||||||| || || ||||| || ||||| ||||| || ||||| || Sbjct 204 AGAGTTATGGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCATCTT 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 880946581561920