Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1661799 114 4e-20 seq1005149 91.5 4e-13 >seq1661799 Length=3983 Score = 114 bits (126), Expect = 4e-20 Identities = 231/341 (68%), Gaps = 4/341 (1%) Strand=Plus/Plus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 ||||| || || ||| ||| | ||||| | |||||| ||| || ||||||||| Sbjct 3041 TTTCTCACCGTTCCATCGTAATTTACCATAACGCTCTCCATAGCCTTAATCAAACGACGC 3100 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 ||||| ||||||||| || |||||||| || |||||||| | ||| ||||||| ||| Sbjct 3101 TGAATGTAACCAGTTTCAGCAGTTTTTACGGCAGTATCAATCAAACCCTCACGACCTCCC 3160 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 ||||||||||| | | |||| || || || | | | ||| |||| || ||| Sbjct 3161 ATAGCATGGAAATAAAACTCTGAGGGAGTAAGTCCGGCCAAGTATGAGTTCTCTACAAAA 3220 Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAG 302778 || | | ||| || || ||| || |||| || || ||||| | || | | Sbjct 3221 CCTCTAGACTCAGGACCATAATCGTCTTTTATAAAATGAGGAAGGGTTCGCTTACGAAAT 3280 Query 302779 CCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAA 302838 || |||| || || || || ||||||||||| || || | || | ||| | || ||| Sbjct 3281 CCAAATGGAATTCGTTTACCCTCAACGTTCTGTTGCCCTACACAGGCAATAACTTGGGAA 3340 Query 302839 ATATTTAAATCACTG--CCCTTGGAGCCAGCATTTACCATA 302877 || || ||| || || || || ||||| ||||||| Sbjct 3341 ATGTT--AATGTTTGATCCTTTAGAACCAGCTACTACCATA 3379 >seq1005149 Length=492 Score = 91.5 bits (100), Expect = 4e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 289120 CCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCG 289179 ||||| | ||||| |||| |||| | | | |||| ||||| ||| ||||| Sbjct 370 CCAACCAAAATTTCATCAAACTCAGGTCCTGCAGCATGAAAGAATGGGACACCCGCTTCC 311 Query 289180 CCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACT 289239 || ||||| || || || || | || || ||||| ||||||||||| |||| ||||| Sbjct 310 CCAGCTACAGCTCTGGCGAGTAAAGTTTTCCCTGTGCCAGGTGGTCCAACTAAGAGAACA 251 Query 289240 CCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACA 289299 || ||||||| || ||||| || | | || || ||| | || ||||||| ||| Sbjct 250 CCTTTTGGTAATTCAGCCCCTAAGGAAGTGAACTTTTCGGGGTTTTTCAAAAATTGCACA 191 Query 289300 ATTTCCTCAAGTTCATATTTTGCCTCATCA 289329 ||||| | | ||| | |||||| || ||| Sbjct 190 ATTTCTTGCAATTCCTGTTTTGCTTCTTCA 161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1440446821570372