Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq1160712 116 1e-21 >seq1160712 Length=560 Score = 116 bits (128), Expect = 1e-21 Identities = 163/226 (72%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 40250 GAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGAT 40309 ||| ||||| || | ||||||||| || || ||||| || |||||||| ||||| || | Sbjct 311 GAAATCGATATCAAAATCGGGCATAGAGACACGCTCAGGATTCAGGAATCGCTCAAACAG 252 Query 40310 GAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACC 40369 | | | |||||||||||||| |||||| || | |||| |||||||| || Sbjct 251 CAAATCATAAGGCAGCGGGTCGAGGTTGGTGATTTTCAGCGCAAAGGCCACCAGCGAGCC 192 Query 40370 GGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAA 40429 ||| | || ||||| |||||||| || || | || ||||||||| |||| || Sbjct 191 TGCCCCCGACCCCCGGCCAGGGCCCACGGGGATGTTTTGCTTCTTCGCCCATTGGATAAA 132 Query 40430 GTCCGCGACGACGAGGAAGTACGACGGG-AACCCCATCTGGATGAT 40474 |||||| |||| || ||||| | |||| || ||||| | ||| || Sbjct 131 GTCCGCAACGATCAGAAAGTA-GCCGGGAAAACCCATGTTGATAAT 87 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160098363082008