Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_021867.1 Length=46978 Score E Sequences producing significant alignments: (Bits) Value seq993347 241 4e-59 >seq993347 Length=487 Score = 241 bits (266), Expect = 4e-59 Identities = 296/402 (74%), Gaps = 2/402 (0%) Strand=Plus/Minus Query 39903 ACATCTGTAAAATAAAATTCTGCGTAAGCTATTTGCCATAACAGAAAATTACTAATGCGG 39962 |||| ||||||||| ||||| || ||||| |||||||||| || |||||||| || || Sbjct 407 ACATTTGTAAAATATAATTCAGCATAAGCAATTTGCCATAGTAGGAAATTACTTATACGT 348 Query 39963 TGTTCGCCACTTGTTCTTATTACTAAATCTACATCAGGTAGATTATGCGTGTAAAGATGC 40022 |||||||| || ||||| || | ||||||||| || |||| ||| ||||||||||||||| Sbjct 347 TGTTCGCCGCTGGTTCTAATAAGTAAATCTACGTCTGGTAAATTTTGCGTGTAAAGATGC 288 Query 40023 TTATTTAATATTGAATCGTCAATAGAATCTATTGAAATTATATTATTTTTAACTTTATCA 40082 ||||||| | || || ||||| || |||||||||||||||||||||||| Sbjct 287 TTATTTATAACCGATTCATCAATTTTTTCAGGCGAAATTATATTATTTTTAACTTTAAGG 228 Query 40083 CTAATTATTTTAACAGCATTTATGATTTCTTCTCTCGATCCGTAGCTTAATGCTAAGGTA 40142 || ||| ||||||| | ||||| ||||||||||| || || |||||||| ||||| || Sbjct 227 CTTATTTTTTTAACTGTATTTAGTATTTCTTCTCTAGAGCCATAGCTTAAAGCTAATGTT 168 Query 40143 AGGGTCATTCTGGTATTGTTTTTTGTTTGCGCTATTACTTCGAGCAATTCTTTTTGAACT 40202 ||| ||| || | || | |||||||| | || || || | || ||||| | ||| Sbjct 167 AGGCACATCCTATTGTTATCTTTTGTTTTTTCAATAACATCTTGTAACTCTTTATAAACC 108 Query 40203 GATTTTGGTAAATTATCAAGGTTTCCTATCGAATTTAACTTTATGTTGTTTTTTACTAAG 40262 || || | | || || ||||| | || ||||| ||||||||| ||| Sbjct 107 TTTTCAGGAAGAGCTTCGGAATTGCCTATGGTTGCTAGTTTTATATTGTTTTTT-TGAAG 49 Query 40263 GTTGCTAAttt-tttttttAAGGAATTAATTAGTATTTTCAT 40303 | || |||| ||||||||||||| || || | |||||| Sbjct 48 TGTACTTATTTCTTTTTTTAAGGAAGAAACAAGAAGTTTCAT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147240681891680