Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1656961 136 3e-27 seq1488354 123 2e-23 seq678478 123 2e-23 seq770237 111 1e-19 seq663341 102 7e-17 seq252373 102 7e-17 seq242576 102 7e-17 seq1135619 93.3 4e-14 >seq1656961 Length=2936 Score = 136 bits (150), Expect = 3e-27 Identities = 146/192 (76%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| |||||||| |||| |||||||| ||||| || ||||| || || | Sbjct 2808 GATGCAGATCTTTGTTAAAACGTTAACTGGTAAAACCATTACTCTTGAAGTTGAGGCTTC 2749 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | |||| |||||| || || ||||| || |||||||| ||||| || || Sbjct 2748 AGATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCA 2689 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | || ||||| || || ||||| || || ||| | ||| | | || ||||| || Sbjct 2688 ACAAAGATTAATCTTCGCAGGAAAACAACTTGAAGATGGGCGAACCCTCTCTGATTACAA 2629 Query 24883 CATTCA-AAAGG 24893 ||| || ||||| Sbjct 2628 CATCCAGAAAGG 2617 >seq1488354 Length=939 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| ||||| |||||||||||||| | ||||||||| | | Sbjct 366 ATGCAAATTTTTGTGAAAACTCTAACTGGTAAAACTATTACTTTGGAAGTAGAACCTTCT 307 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| |||||| || ||| ||| || || || ||||| || || || || || ||| Sbjct 306 GACACCATAGAAAATGTCAAAGCAAAAATTCAGGATAAAGAGGGTATTCCACCAGACCAA 247 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | | || ||||| || ||||| |||| ||| |||| || || || || Sbjct 246 CAAAGGCTTATATTTGCTGGAAAACAATTGGAAGATGGAAGAACATTGAGTGACTACAAT 187 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916 |||||||| ||||| || || || || |||||| Sbjct 186 ATTCAAAAAGAATCTACCCTTCATTTAGTGTTG 154 Score = 120 bits (132), Expect = 3e-22 Identities = 169/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | ||||| |||| || || || || || | ||||||||| | | Sbjct 823 GATGCAGATCTTTGTCAAAACTTTAACTGGAAAGACCATAACTTTGGAAGTAGAATCTTC 764 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | |||| || || ||| || || || |||||||| || || || || || Sbjct 763 AGACACTATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCGGACCA 704 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA--GATTAT 24880 |||| | | |||||||| ||||||||| |||| ||| ||| ||||| | | ||||| Sbjct 703 ACAAAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGAG-AACAT-TAAGTGATTAC 646 Query 24881 AACATTCAAAAGGAATCGACACTACA-CTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||| ||||| || ||| |||| |||| | || |||| | ||||| Sbjct 645 AATATTCAGAAGGAGTCTACATTACATCTTGTTCTT-AGATTAAGAGGAGG 596 Score = 105 bits (116), Expect = 6e-18 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || |||| || |||||||| || | |||||||| | | Sbjct 594 ATGCAAATTTTTGTGAAGACCTTAACGGGAAAAACTATCACCTTGGAAGTAGAGCCTTCA 535 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || ||| ||| || || || ||||| || || || || || ||| Sbjct 534 GACACAATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAGGGTATTCCACCAGACCAA 475 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | || || ||||| || ||||| || || ||| |||| | |||||||| Sbjct 474 CAGAGATTAATTTTTGCTGGAAAACAACTAGAAGATGGCAGAACGCTTAGTGATTATAAT 415 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 |||||||||||||| ||| |||| |||| Sbjct 414 ATTCAAAAGGAATCCACATTACATCTTG 387 >seq678478 Length=406 Score = 123 bits (136), Expect = 2e-23 Identities = 166/228 (73%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765 ||| || || | ||||| || || || ||||| || || |||||||| ||||| | || Sbjct 1 GCAAATTTTCGTCAAAACCCTTACAGGAAAAACAATCACCCTCGAAGTTGAAGCTTCAGA 60 Query 24766 CACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACA 24825 |||| | || | |||||| || ||||||||||||||||| || || ||||||||||| Sbjct 61 CACAATTGAGAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCACCCGATCAACA 120 Query 24826 ACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACA-TGTCAGATTATAA 24882 | ||||| ||||| || || || || || ||| ||| ||| || || || || Sbjct 121 GAGATTGATTTTTGCTGGAAAGCAACTAGAAGATGGTCG---TACATTGAGTGACTACAA 177 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| ||||| || || ||||| || || || |||| ||| | ||||| Sbjct 178 CATCCAAAAAGAGTCCACACTCCATTTAGTTCTGCGGTTGAGAGGAGG 225 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | ||||| || || || ||||||||||| || || || ||||| | Sbjct 227 ATGCAAATCTTTGTGAAAACTCTTACGGGGAAAACTATTACCCTAGAGGTTGAAGCATCT 286 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| |||||| ||| |||||||| ||||| || || || || || || Sbjct 287 GACACTATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAGGGTATTCCACCAGACCAG 346 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 || | || || ||||| || || || || || ||| Sbjct 347 CAGAGATTAATTTTTGCTGGAAAGCAACTTGAAGAT 382 >seq770237 Length=425 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| | || || || || || || || ||||| || | | Sbjct 54 ATGCAGATCTTTGTGAAAACTTTGACTGGGAAGACCATAACACTAGAAGTTGAGCCTTCA 113 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || || |||||| ||||| |||||||| || || || || || Sbjct 114 GATACAATTGAAAATGTCAAGGCAAAGATTCAAGATAAAGAAGGTATCCCACCAGACCAG 173 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA--GATTATA 24881 ||| | ||||| ||||| || |||||||| |||||| | | | | ||| || || | Sbjct 174 CAAAGGTTGATTTTTGCAGGAAAACAGCTTGAGGATGGGCGTA--CTCTCAGTGACTACA 231 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | || ||||| ||||| || || || || |||||| | ||| | || || Sbjct 232 ATATCCAAAAAGAATCCACTCTGCATTTAGTGTTGAGGTTGAGAGGGGG 280 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | ||||| | || ||||| || || || || ||||| ||||| | Sbjct 282 ATGCAAATCTTTGTGAAAACTTTGACTGGTAAGACCATCACCCTTGAAGTTGAAGCATCA 341 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || || | ||| | ||| ||||||||||||||||| || || |||||||| Sbjct 342 GACACGATTGAGAATGTTAAGGCTAAA-ATCCAAGACAAAGAAGGCATTCCACCCGATCA 400 Query 24823 ACAACGTTTGATCTTTGCCGGGAA 24846 || | || || ||||| || || Sbjct 401 GCAGAGATTAATTTTTGCTGGAAA 424 >seq663341 Length=403 Score = 102 bits (112), Expect = 7e-17 Identities = 162/228 (71%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | ||||| || || || ||||||||||| || || || ||||| | Sbjct 179 ATGCAAATCTTTGTGAAAACTCTTACGGGGAAAACTATTACCCTAGAGGTTGAAGCATCT 238 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| |||||| ||| |||||||| ||||| || || || || || || Sbjct 239 GACACTATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAGGGTATTCCACCAGACCAG 298 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACAT-GTCAGATTAT 24880 || | || || ||||| || || || || || ||| ||| | | | || || ||| Sbjct 299 CAGAGATTAATTTTTGCTGGAAAGCAACTTGAAGATGGTCG-TACTCTTAGT--GACTAT 355 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGA 24928 || || || || ||||| ||||| || || || || | ||| | ||| Sbjct 356 AATATCCAGAAAGAATCCACACTCCATTTAGTTCTGAGGTTGAGAGGA 403 Score = 91.5 bits (100), Expect = 1e-13 Identities = 130/180 (72%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 24755 GAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCT 24814 ||||| | ||||| | |||| |||||| || ||||||||||||||||| || || Sbjct 2 GAAGCTTCAGACACTATCGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCA 61 Query 24815 CCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACA-TG 24871 |||||||| || | || || ||||| || || || || || ||| ||| ||| || Sbjct 62 CCCGATCAGCAGAGATTAATTTTTGCTGGAAAGCAACTAGAAGATGGTCG---TACATTG 118 Query 24872 TCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| ||||| ||||| || || || |||| ||| | |||||| Sbjct 119 AGTGACTACAACATCCAAAAAGAATCCACACTCCATTTAGTTCTGCGGTTGAGAGGAGGC 178 >seq252373 Length=335 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || | || || || ||||| || || || || || || | Sbjct 255 ATGCAAATTTTCGTTAAGACTTTGACTGGGAAGACTATAACTCTAGAGGTTGAGGCAAGT 196 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| || || ||||| ||||||||||| || || || ||| Sbjct 195 GATACCATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGAATTCCCCCTGACCAA 136 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || |||||| |||| ||| | ||| |||| ||||| || Sbjct 135 CAGCGATTGATCTTTGCTGGCAAACAGTTGGAAGATGGGCGAACACTGTCCGATTACAAT 76 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || || | || |||| || || Sbjct 75 ATTCAGAAAGAGTGTACTTTACATTTAGT 47 >seq242576 Length=334 Score = 102 bits (112), Expect = 7e-17 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | ||||| |||| || || || || || | ||||||||| | | Sbjct 184 GATGCAGATCTTTGTCAAAACTTTAACTGGAAAGACCATAACTTTGGAAGTAGAATCGTC 125 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | |||| || || ||| || || || |||||||| || || || || || Sbjct 124 AGACACTATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCGGACCA 65 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAA 24866 |||| | | |||||||| ||||||||| |||| ||| ||||| Sbjct 64 ACAAAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGAGAA 21 >seq1135619 Length=547 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/142 (76%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 24791 ATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAG 24850 ||||||||||||||||| || || |||||||| || | ||||| ||||| || || || Sbjct 2 ATCCAAGACAAAGAAGGCATTCCACCCGATCAGCAGAGATTGATTTTTGCTGGAAAGCAA 61 Query 24851 CTGGAGGAT--TCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACT 24908 || || ||| ||| | || | | ||||| ||||| ||||||||||| || || |||| Sbjct 62 CTTGAAGATGGTCG-CACACTTAGC-GATTACAACATCCAAAAGGAATCTACGCTCCACT 119 Query 24909 TGGTGTTGCGATTGCGCGGAGG 24930 |||| | ||||| | ||||| Sbjct 120 TGGTACTTAGATTGAGAGGAGG 141 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| |||| || || || || || || ||||| ||| | | Sbjct 143 ATGCAAATATTTGTCAAAACCTTAACTGGAAAGACCATCACTCTTGAAGTTGAACCTTCA 202 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || || || |||||||| ||||||||||| || || || || Sbjct 203 GATACAATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGAATCCCACCAGACCAG 262 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || | ||||| ||||| || || || || || ||| ||| | || || || || | Sbjct 263 CAGAGATTGATTTTTGCTGGAAAGCAACTTGAAGATGGTCG-CACAC-TGAGTGACTACA 320 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| |||||||| || || || || || || ||| | || | ||||| Sbjct 321 ACATCCAAAAGGAGTCCACTCTTCATTTAGTATTGAGGCTGAGAGGAGG 369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440542226851680