Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1512876 98.7 8e-16 seq1488354 98.7 8e-16 seq770237 91.5 1e-13 >seq1512876 Length=1012 Score = 98.7 bits (108), Expect = 8e-16 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 34500 TCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTT 34559 |||||| || || || | ||| ||||||||| || ||||||||||||||||||||||| Sbjct 183 TCCAAGAGCTTTAGCAACTTCAACCATGTTGACAATAACAGTCTTGATGCCGTTGCCCTT 124 Query 34560 TCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATT 34619 |||||| |||||||| | | ||||| || || || ||||| | ||| | ||| | Sbjct 123 TCCTTCCACCTTGGCTAACAATTTTGGCATCTTATACCGATAGAAGGTGTCGGTGACACT 64 Query 34620 GCGGTTAACGTT 34631 ||| || ||||| Sbjct 63 GCGATTTACGTT 52 >seq1488354 Length=939 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||| |||||| |||| || ||||| ||||| | ||| || ||| Sbjct 367 AATGCAAATTTTTGTGAAAACTCTAACTGGTAAAACTATTACTTTGGAAGTAGAACCTTC 308 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || | | | || ||| || ||| || ||||| || | || || || Sbjct 307 TGACACCATAGAAAATGTCAAAGCAAAAATTCAGGATAAAGAGGGTATTCCACCAGACCA 248 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 |||||| ||||| | ||| || ||||| |||| |||| |||||| || || ||||| Sbjct 247 ACAAAGGCTTATATTTGCTGGAAAACAATTGGAAGATGGAAGAACATTGAGTGACTACAA 188 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACT 110490 ||||||||||||||||| | || | ||||| || || Sbjct 187 TATTCAAAAAGAATCTACCCTTCATTTAGTGTTGAGGCT 149 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||||||||||||||| || || ||||| || | ||| || || Sbjct 822 ATGCAGATCTTTGTCAAAACTTTAACTGGAAAGACCATAACTTTGGAAGTAGAATCTTCA 763 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| | | | || || || ||| || |||||||| | || ||| ||| Sbjct 762 GACACTATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCGGACCAA 703 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||||| ||||| | ||| || |||||| |||| |||| |||||| | |||||||| Sbjct 702 CAAAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGAGAACATTAAGTGATTACAAT 643 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||||| || || ||||| || || | || | ||| | |||| |||| Sbjct 642 ATTCAGAAGGAGTCTACATTACATCTTGTTCTTAGATTAAGAGGAGGAA 594 >seq770237 Length=425 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 |||||||| || ||||| |||||||| || || || ||||| || | ||| |||||| Sbjct 51 AAAATGCAGATCTTTGTGAAAACTTTGACTGGGAAGACCATAACACTAGAAGTTGAGCCT 110 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||||| | | | || || |||||| || |||||||| | || || Sbjct 111 TCAGATACAATTGAAAATGTCAAGGCAAAGATTCAAGATAAAGAAGGTATCCCACCAGAC 170 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || ||||| | |||| ||| || |||||||| ||||||| | || | || ||| Sbjct 171 CAGCAAAGGTTGATTTTTGCAGGAAAACAGCTTGAGGATGGGCGTACTCTCAGTGACTAC 230 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || || ||||||||||| || |||| | ||||| || || ||||||| Sbjct 231 AATATCCAAAAAGAATCCACTCTGCATTTAGTGTTGAGGTTGAGAGGGGG 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404471406341108