Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1135619 96.9 2e-15 seq663341 93.3 3e-14 seq1656961 87.8 1e-12 seq1605470 86.0 4e-12 >seq1135619 Length=547 Score = 96.9 bits (106), Expect = 2e-15 Identities = 166/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 34737 ATATCCAATCATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAA 34796 |||| || | ||||||||| |||| ||||| || | |||| ||| |||||| || | Sbjct 383 ATATTCATTAATTTCCTCCTCTCAGCCTCAATACTAAATGAAGAGTGGACTCCTTTTGGA 324 Query 34797 TGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTT 34856 |||| ||||| || |||| |||| || ||||||||||| || || |||| || | Sbjct 323 TGTTGTAGTCACTCAGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCT 264 Query 34857 GCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATT 34916 |||||||| | || | || || || || | ||||| || || | | || | | Sbjct 263 GCTGGTCTGGTGGGATTCCTTCTTTATCTTGGATTTTAGCCTTAACATTTTCAATTGTAT 204 Query 34917 CATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976 | | || || |||| || ||||||||||| || | ||| || ||||| || |||| Sbjct 203 CTGAAGGTTCAACTTCAAGAGTGATGGTCTTTCCAGTTAAGGTTTTGACAAATATTTGCA 144 Query 34977 T 34977 | Sbjct 143 T 143 >seq663341 Length=403 Score = 93.3 bits (102), Expect = 3e-14 Identities = 156/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 34753 TCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAG 34812 ||| ||||||||||| || | || | ||| || ||||| || |||||||| || Sbjct 403 TCCTCTCAACCTCAGAACTAAATGGAGTGTGGATTCTTTCTGGATATTATAGTCACTAAG 344 Query 34813 GCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCAC 34872 | || |||| || ||||||||||| || || || | || ||||||||| | || | Sbjct 343 AGTACGACCATCTTCAAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGGTCTGGTGGAAT 284 Query 34873 CCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATC 34932 ||||| || || | |||||| ||| || | | || | ||| || || || || Sbjct 283 ACCCTCTTTATCTTGGATTTTTGCTTTTACATTTTCGATAGTGTCAGATGCTTCAACCTC 224 Query 34933 AACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | ||| || || || ||||| || || || |||||||| |||||| Sbjct 223 TAGGGTAATAGTTTTCCCCGTAAGAGTTTTCACAAAGATTTGCATG 178 >seq1656961 Length=2936 Score = 87.8 bits (96), Expect = 1e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 ||||| ||||| || || || ||| | ||| |||| || ||||| ||||| |||||||| Sbjct 2620 TTCTGGATGTTGTAATCAGAGAGGGTTCGCCCATCTTCAAGTTGTTTTCCTGCGAAGATT 2679 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909 | || ||| ||||| | || | || ||||| || | ||||| ||| || | | Sbjct 2680 AATCTTTGTTGGTCAGGAGGGATTCCTTCCTTATCTTGAATTTTGGCTTTTACATTTTCA 2739 Query 34910 ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAG 34969 || | || ||||| || |||| || ||||| || || || | || || |||||| Sbjct 2740 ATAGTATCTGAAGCCTCAACTTCAAGAGTAATGGTTTTACCAGTTAACGTTTTAACAAAG 2799 Query 34970 ATCTGCAT 34977 |||||||| Sbjct 2800 ATCTGCAT 2807 >seq1605470 Length=1495 Score = 86.0 bits (94), Expect = 4e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 34737 ATATCCAATCATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAA 34796 |||| || | ||||||||| |||| ||||| || | |||| ||| |||||| || | Sbjct 168 ATATTCATTAATTTCCTCCTCTCAGCCTCAATACTAAATGAAGAGTGGACTCCTTTTGGA 109 Query 34797 TGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTT 34856 |||| ||||| || |||| |||| || ||||||||||| || || |||| || | Sbjct 108 TGTTGTAGTCACTCAGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCT 49 Query 34857 GCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTT 34893 |||||||| | || | || || || || | ||||| Sbjct 48 GCTGGTCTGGTGGGATTCCTTCTTTATCTTGGATTTT 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 319089512421164