Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq678478 127 2e-24 seq1488354 123 2e-23 seq1135619 123 2e-23 seq663341 118 1e-21 seq242576 107 2e-18 seq770237 95.1 1e-14 >seq678478 Length=406 Score = 127 bits (140), Expect = 2e-24 Identities = 163/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||||| || |||| ||||||||| | ||| || |||||||| |||||||| || ||| Sbjct 225 CCTCCTCTCAACCGCAGAACTAAATGGAGTGTGGACTCTTTTTGGATGTTGTAGTCACTC 166 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||| | ||||| ||||| || |||||| | |||| | || |||||||| || Sbjct 165 AATGTACGACCATCTTCTAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCGGGTGGA 106 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 |||||||||||||| ||||| ||||| | || | ||||||| | ||| ||| Sbjct 105 ATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTCTCAATTGTGTCTGAAGCTTCAACT 46 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGC 137409 || | || | || || || || | ||||| ||||| |||||| Sbjct 45 TCGAGGGTGATTGTTTTTCCTGTAAGGGTTTTGACGAAAATTTGC 1 >seq1488354 Length=939 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 137258 ||| |||||||||| |||||||||||||| || ||||| || |||| ||| || || Sbjct 154 CAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTCAATGTTCTTCCATC 213 Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||| | |||||| |||||| | || || | ||| || || || || || || ||||| || Sbjct 214 TTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGGAATACCCTCTTTATC 273 Query 137319 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGT 137378 ||||||| ||| | | ||| | ||||| | ||||||||||| | ||| | || Sbjct 274 CTGAATTTTTGCTTTGACATTTTCTATGGTGTCAGAAGGTTCTACTTCCAAAGTAATAGT 333 Query 137379 CTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || || || | ||||| || || |||||||| Sbjct 334 TTTACCAGTTAGAGTTTTCACAAAAATTTGCAT 366 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| | || || | ||| | ||||| || |||||||||||||| || ||||||||| Sbjct 824 CCTCCCCTCAACCGAAGAACAAGATGAAGCGTGGATTCTTTTTGTATATTATAATCGCTC 883 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGG 137300 | ||| || ||||| ||||||||||||||| | || || | ||| ||||| || Sbjct 884 AATGTTCTACCATCTTCAAGTTGTTTACCAGCAAATATAAGCCTTTGTTGATCTGG 939 >seq1135619 Length=547 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||||| | | ||| |||||||||| || || || ||||| |||||||| || ||| Sbjct 369 CCTCCTCTCAGCCTCAATACTAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCACTC 310 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||||| ||||| ||||| || |||||| | |||| | ||||| || || || Sbjct 309 AGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 250 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || |||||||| || ||||| || | | ||| | || |||| ||||| ||| Sbjct 249 ATTCCTTCTTTATCTTGGATTTTAGCCTTAACATTTTCAATTGTATCTGAAGGTTCAACT 190 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 137415 |||| ||| | ||||| || || || ||||| || |||||||||||| || Sbjct 189 TCAAGAGTGATGGTCTTTCCAGTTAAGGTTTTGACAAATATTTGCATACCT 139 Score = 98.7 bits (108), Expect = 9e-16 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 |||||||| ||||| |||||||||||||| | ||||| ||||| ||||| || ||| Sbjct 111 GTAGATTCCTTTTGGATGTTGTAATCGCTAAGTGTGCGACCATCTTCAAGTTGCTTTCCA 52 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||| | |||| | ||||||||||| || |||||||||||||| Sbjct 51 GCAAAAATCAATCTCTGCTGATCGGGTGGAATGCCTTCTTTGTC 8 >seq663341 Length=403 Score = 118 bits (130), Expect = 1e-21 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 |||||||| || |||| ||||||||| | ||| ||||||||||| |||||||| || || Sbjct 178 GCCTCCTCTCAACCGCAGAACTAAATGGAGTGTGGATTCTTTTTGGATGTTGTAGTCACT 119 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || ||| | ||||| ||||| || |||||| | || | | ||||||||||| || Sbjct 118 CAATGTACGACCATCTTCTAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGATCGGGTGG 59 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTG 137353 |||||||||||||| ||||| ||||| | ||| | ||||||| Sbjct 58 AATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCGATAGTGTCTG 9 >seq242576 Length=334 Score = 107 bits (118), Expect = 2e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| | || || | ||| | ||||| || |||||||||||||| || ||||||||| Sbjct 185 CCTCCCCTCAACCGAAGAACAAGATGAAGCGTGGATTCTTTTTGTATATTATAATCGCTC 244 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||| || ||||| ||||||||||||||| | || || | ||| ||||| || || Sbjct 245 AATGTTCTACCATCTTCAAGTTGTTTACCAGCAAATATAAGCCTTTGTTGATCTGGTGGG 304 Query 137305 ATGCCTTCTTTGTCGGTAATTTTT 137328 || |||||||| || ||||||| Sbjct 305 ATACCTTCTTTATCCTGAATTTTT 328 >seq770237 Length=425 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| || | ||| |||||||| | || ||||||||||| || ||||| || || Sbjct 280 CCCCCTCTCAACCTCAACACTAAATGCAGAGTGGATTCTTTTTGGATATTGTAGTCACTG 221 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | | || || || ||||| || ||| | |||| | |||||| || || || Sbjct 220 AGAGTACGCCCATCCTCAAGCTGTTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGTGGG 161 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || |||||||| || ||| ||| || | | ||| | || |||| || || ||| Sbjct 160 ATACCTTCTTTATCTTGAATCTTTGCCTTGACATTTTCAATTGTATCTGAAGGCTCAACT 101 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | ||||| || ||||| ||||| || || || ||||| Sbjct 100 TCTAGTGTTATGGTCTTCCCAGTCAAAGTTTTCACAAAGATCTGCAT 54 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478384996219200