Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq1374022 98.7 1e-15 seq1294437 93.3 5e-14 seq1339226 91.5 2e-13 seq37400 87.8 2e-12 >seq1374022 Length=732 Score = 98.7 bits (108), Expect = 1e-15 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 8653 CTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTC 8712 || |||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| Sbjct 251 CTCATTCCTCGGTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTC 310 Query 8713 GATTCCCCGACGAGGAG 8729 ||||||||| || |||| Sbjct 311 GATTCCCCGCCGGGGAG 327 Score = 93.3 bits (102), Expect = 5e-14 Identities = 68/78 (87%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 11724 ACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTT 11782 || || |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||| Sbjct 250 ACTCATTCCTCGGTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTT 309 Query 11783 CGATTCCCCGACGAGGAG 11800 |||||||||| || |||| Sbjct 310 CGATTCCCCGCCGGGGAG 327 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 327 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 268 Query 139413 TACTAACGAGGA 139424 ||||| |||||| Sbjct 267 TACTACCGAGGA 256 >seq1294437 Length=650 Score = 93.3 bits (102), Expect = 5e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 452 TTCCTCGGTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 511 Query 8717 CCCCGACGAGG 8727 ||||| || || Sbjct 512 CCCCGCCGGGG 522 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 453 TCCTCGGTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 512 Query 11789 CCCGACGAGGAGGGA 11803 |||| || || |||| Sbjct 513 CCCGCCGGGGCGGGA 527 Score = 82.4 bits (90), Expect = 1e-10 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 139355 CCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTATA 139414 || || |||||| |||||||||||||||||| | |||| |||||||| | ||||||||| Sbjct 522 CCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATA 463 Query 139415 CTAACGAGGA 139424 ||| |||||| Sbjct 462 CTACCGAGGA 453 >seq1339226 Length=692 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||| |||||||||||| ||||| |||| ||||| |||||||||||||||||||| Sbjct 625 TTCCTCGGTAGTATAGTGGTGAGTATCCCCGCCTGTCATGCGGGAGACCGGGGTTCGATT 566 Query 8717 CCCCGACGAGGAG 8729 ||||| || |||| Sbjct 565 CCCCGCCGGGGAG 553 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||| Sbjct 624 TCCTCGGTAGTATAGTGGTGAGTATCCCCGCCTGTCATGCGGGAGACCGGGGTTCGATTC 565 Query 11789 CCCGACGAGGAGG 11801 |||| || ||||| Sbjct 564 CCCGCCGGGGAGG 552 >seq37400 Length=305 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||| || ||||||||| |||| |||| ||||| | |||||||||||||||||||| Sbjct 222 TTCCTCGGTATTATAGTGGTGAGTACCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 163 Query 8717 CCCCGACGAGGAG 8729 ||||| || |||| Sbjct 162 CCCCGCCGGGGAG 150 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| || ||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 221 TCCTCGGTATTATAGTGGTGAGTACCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 162 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 161 CCCGCCGGGGAG 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 639269251448640