Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq678478 91.5 1e-13 seq1409350 84.2 2e-11 >seq678478 Length=406 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAG 133513 ||||| | ||||||||||| || || ||||| || | || || ||| | || || || Sbjct 204 AAATGGAGTGTGGACTCTTTTTGGATGTTGTAGTCACTCAATGTACGACCA-TCTTCTAG 146 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || || |||| | | ||| || ||||| || |||||||| ||||| ||| Sbjct 145 TTGCTTTCCAGCAAAAATCAATCTCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGAT 86 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| || || | | ||||| ||||| | | || || |||| ||||| ||||| | Sbjct 85 -TTTAGCTTTTACATTCTCAATTGTGTCTGAAGCTTCAACTTCGAGGGTGATTGTTTTTC 27 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGC 133658 | || || ||||| |||||||| ||| Sbjct 26 CTGTAAGGGTTTTGACGAAAATTTGC 1 >seq1409350 Length=781 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 148851 TCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCC 148910 |||||||| | | | || ||||| || | |||||||||| ||| || || |||| Sbjct 170 TCATCCGGAGACGTAAATTCCACGATTTCTGTGCACAGATTGGAGCACTTTATTGTGCCC 229 Query 148911 ACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCA 148970 | ||| || || |||||||| | |||||| ||||||||||||| ||| ||||| || Sbjct 230 AAGTTATTCTGGTTGCTCTTCCGGTTGCAAGCGTCCTTGTACAACATATACGGAGTCCCG 289 Query 148971 GTTTCCACCTG 148981 ||||| | ||| Sbjct 290 GTTTCAATCTG 300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473368330345440