Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1488354 132 1e-25 seq242576 105 2e-17 seq1135619 104 5e-17 seq678478 102 2e-16 seq252373 89.7 1e-12 >seq1488354 Length=939 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| | || ||||| || || ||||||||||| ||| ||| ||| Sbjct 819 CAGATCTTTGTCAAAACTTTAACTGGAAAGACCATAACTTTGGAAGTAGAATCTTCAGAC 760 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| ||| ||||| || |||||||| || |||||| ||| Sbjct 759 ACTATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCGGACCAACAA 700 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || |||||||| || || || |||||||||||||| || || || |||||||| | Sbjct 699 AGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGAGAACATTAAGTGATTACAATATT 640 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||| |||||||| | || |||||| | ||| Sbjct 639 CAGAAGGAGTCTACATTACATCTTGTTCTTAGA 607 Score = 131 bits (144), Expect = 4e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || ||||| || ||||||||||| ||| ||||||||| | ||| Sbjct 351 AAAACTCTAACTGGTAAAACTATTACTTTGGAAGTAGAACCTTCTGACACCATAGAAAAT 292 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||||||| ||||| || ||||| || ||| || ||| ||||| ||||| || Sbjct 291 GTCAAAGCAAAA-ATTCAGGATAAAGAGGGTATTCCACCAGACCAACAAAGGCTTATATT 233 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || ||||| || |||||||||||||| || ||| || ||||| | || ||||| || Sbjct 232 TGCTGGAAAACAATTGGAAGATGGAAGAACATTGAGTGACTACAATATTCAAAAAGAATC 173 Query 206364 TACTCTTCACCTTGTTTTGAGACT 206387 ||| ||||| | || ||||| || Sbjct 172 TACCCTTCATTTAGTGTTGAGGCT 149 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 || ||||| || | ||||| ||||| ||||| || | ||| |||||| ||| || ||| Sbjct 149 AGCCTCAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTCAATGTTCTT 208 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||||| || ||||| || || ||||||| |||||| Sbjct 209 CCATCTTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTG 249 >seq242576 Length=334 Score = 105 bits (116), Expect = 2e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| | || ||||| || || ||||||||||| ||| || ||| Sbjct 180 CAGATCTTTGTCAAAACTTTAACTGGAAAGACCATAACTTTGGAAGTAGAATCGTCAGAC 121 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| ||| ||||| || |||||||| || |||||| ||| Sbjct 120 ACTATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCGGACCAACAA 61 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAA 206348 || |||||||| || || || |||||||||||||| || || || |||||||| Sbjct 60 AGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGAGAACATTAAGTGATTACAA 5 >seq1135619 Length=547 Score = 104 bits (114), Expect = 5e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| |||||| | || ||||| || |||||| | ||||| ||| ||| || Sbjct 146 CAAATATTTGTCAAAACCTTAACTGGAAAGACCATCACTCTTGAAGTTGAACCTTCAGAT 205 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | ||| || ||| || || ||||| ||||||||||| || ||| || Sbjct 206 ACAATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGAATCCCACCAGACCAGCAG 265 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || || || |||||||| | |||||||| | || || || |||||| || Sbjct 266 AGATTGATTTTTGCTGGAAAGCAACTTGAAGATGGTCGCACACTGAGTGACTACAACATC 325 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || || ||||| |||||||| | || ||||| || Sbjct 326 CAAAAGGAGTCCACTCTTCATTTAGTATTGAGGCT 360 >seq678478 Length=406 Score = 102 bits (112), Expect = 2e-16 Identities = 138/190 (73%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| || ||||||||||| ||||| | ||||| ||| ||| |||||| | || Sbjct 13 CAAAACCCTTACAGGAAAAACAATCACCCTCGAAGTTGAAGCTTCAGACACAATTGAGAA 72 Query 206244 AGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 || ||||| ||| || ||||| |||||||| ||| || || || ||| | || | Sbjct 73 TGTAAAAGCTAAA-ATCCAAGACAAAGAAGGCATTCCACCCGATCAACAGAGATTGATTT 131 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 | || |||||||| | |||||||| | || ||| || |||||| |||| ||||||| Sbjct 132 TTGCTGGAAAGCAACTAGAAGATGGTCGTACATTGAGTGACTACAACATCCAAAAAGAGT 191 Query 206363 CTACTCTTCA 206372 | || || || Sbjct 192 CCACACTCCA 201 >seq252373 Length=335 Score = 89.7 bits (98), Expect = 1e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| || |||||||| |||||||||||| || ||| || || | ||||| Sbjct 180 GTAAAGGCTAAAATTCAAGATAAAGAAGGAATTCCCCCTGACCAACAGCGATTGATCTTT 121 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || |||||||||||||| | || || |||||||||| | |||||||||| | Sbjct 120 GCTGGCAAACAGTTGGAAGATGGGCGAACACTGTCCGATTACAATATTCAGAAAGAGTGT 61 Query 206365 ACTCTTCACCTTGTTTTGAGACTT 206388 ||| | || | || | |||||| Sbjct 60 ACTTTACATTTAGTACTCAGACTT 37 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156631103627076