Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1488354 105 6e-18 seq770237 98.7 9e-16 seq678478 98.7 9e-16 seq252373 96.9 3e-15 seq1656961 86.0 6e-12 seq663341 84.2 2e-11 >seq1488354 Length=939 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| || ||||| | | | || ||||||||||| |||||||| |||| || | ||| Sbjct 154 CAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTCAATGTTCTTCCATC 213 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| | ||||| || | | | || || | ||||| ||||| || || || |||||||| Sbjct 214 TTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGGAATACCCTCTTTATC 273 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||||||| ||| | | ||| | || || | || || ||||| | || | || Sbjct 274 CTGAATTTTTGCTTTGACATTTTCTATGGTGTCAGAAGGTTCTACTTCCAAAGTAATAGT 333 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||||| |||||||| | ||||| ||||| Sbjct 334 TTTACCAGTTAGAGTTTTCACAAAAATTTGCAT 366 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| | ||||| | ||||| || ||||| ||||| || || | || | | |||||| Sbjct 613 AACAAGATGTAATGTAGACTCCTTCTGAATATTGTAATCACTTAATGTTCTCCCATCTTC 672 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | |||||| || | | |||| || | ||||| || || || || ||||||||||| Sbjct 673 CAACTGTTTCCCTGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATACCTTCTTTATCCTG 732 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||||| || | | ||| | ||| || | | || ||||| | || | || || Sbjct 733 AATTTTTGCCTTAACATTTTCAATAGTGTCTGAAGATTCTACTTCCAAAGTTATGGTCTT 792 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| | |||||| | || |||||||| Sbjct 793 TCCAGTTAAAGTTTTGACAAAGATCTGCAT 822 >seq770237 Length=425 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| | ||| || ||||| | | || |||||||| || |||||||| || | ||||| Sbjct 272 CAACCTCAACACTAAATGCAGAGTGGATTCTTTTTGGATATTGTAGTCACTGAGAGTACG 213 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 | ||| || |||||||| || | | | || | | || || ||||| || || ||||| Sbjct 212 CCCATCCTCAAGCTGTTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGTGGGATACCTTC 153 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 |||||| ||| ||| || | | ||| | ||||| | ||||| ||||| | || Sbjct 152 TTTATCTTGAATCTTTGCCTTGACATTTTCAATTGTATCTGAAGGCTCAACTTCTAGTGT 93 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || || ||||||| |||||| | || |||||||| Sbjct 92 TATGGTCTTCCCAGTCAAAGTTTTCACAAAGATCTGCAT 54 >seq678478 Length=406 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| |||| ||| ||||| | | ||||||||||| ||||||||||| |||| ||||| Sbjct 217 CAACCGCAGAACTAAATGGAGTGTGGACTCTTTTTGGATGTTGTAGTCACTCAATGTACG 158 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || || || || | | | || | | ||||||||| || || |||||||| Sbjct 157 ACCATCTTCTAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCGGGTGGAATGCCTTC 98 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 ||| || ||||| ||| | | || | || || | | || ||||||| || Sbjct 97 TTTGTCTTGGATTTTAGCTTTTACATTCTCAATTGTGTCTGAAGCTTCAACTTCGAGGGT 38 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGC 132121 | ||||| || || || ||||| | |||||| ||| Sbjct 37 GATTGTTTTTCCTGTAAGGGTTTTGACGAAAATTTGC 1 >seq252373 Length=335 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 || ||||||| | ||||||| ||||| ||||| ||| || || ||| |||||| Sbjct 47 ACTAAATGTAAAGTACACTCTTTCTGAATATTGTAATCGGACAGTGTTCGCCCATCTTCC 106 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | |||||| || | | |||| | |||||||| || || || || ||||||||||| | Sbjct 107 AACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATTCCTTCTTTATCTTGA 166 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | ||| | ||||| | | ||| || || | || | || || Sbjct 167 ATTTTAGCCTTTACATTTTCAATGGTATCACTTGCCTCAACCTCTAGAGTTATAGTCTTC 226 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATGA 132125 ||||||| ||| || | |||||| ||||||| Sbjct 227 CCAGTCAAAGTCTTAACGAAAATTTGCATGA 257 >seq1656961 Length=2936 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 131934 CTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGA 131993 |||| || |||||||| || | ||| ||| |||||| || ||||| || | ||| Sbjct 2618 CTTTCTGGATGTTGTAATCAGAGAGGGTTCGCCCATCTTCAAGTTGTTTTCCTGCGAAGA 2677 Query 131994 TTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTT 132053 ||| | ||||| || ||||| || ||||| ||||| |||||| ||| | | || Sbjct 2678 TTAATCTTTGTTGGTCAGGAGGGATTCCTTCCTTATCTTGAATTTTGGCTTTTACATTTT 2737 Query 132054 CCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGA 132113 | | |||||| | | ||| ||||| | || | ||||||||||| | ||||| | | Sbjct 2738 CAATAGTATCTGAAGCCTCAACTTCAAGAGTAATGGTTTTACCAGTTAACGTTTTAACAA 2797 Query 132114 AAATCTGCAT 132123 | |||||||| Sbjct 2798 AGATCTGCAT 2807 >seq663341 Length=403 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| |||| ||| ||||| | | || |||||||| ||||||||||| |||| ||||| Sbjct 169 CAACCGCAGAACTAAATGGAGTGTGGATTCTTTTTGGATGTTGTAGTCACTCAATGTACG 110 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || || || || | | | |||| | ||| ||||| || || |||||||| Sbjct 109 ACCATCTTCTAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGATCGGGTGGAATGCCTTC 50 Query 132025 TTTATC 132030 ||| || Sbjct 49 TTTGTC 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466700332232160