Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1488354 134 1e-26 seq663341 129 5e-25 seq1135619 118 9e-22 seq770237 116 3e-21 seq678478 113 4e-20 seq242576 107 2e-18 seq1644865 89.7 4e-13 seq1605470 89.7 4e-13 seq509544 84.2 2e-11 >seq1488354 Length=939 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| |||| || ||| | || || | ||||| ||| | Sbjct 366 ATGCAAATTTTTGTGAAAACTCTAACTGGTAAAACTATTACTTTGGAAGTAGAACCTTCT 307 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || ||| ||||||| |||||||||||||| || || || || Sbjct 306 GACACCATAGAAAATGTCAAAGCAAAAATTCAGGATAAAGAGGGTATTCCACCAGACCAA 247 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||| || || | | || |||||| | ||||||| |||| | || || |||||| Sbjct 246 CAAAGGCTTATATTTGCTGGAAAACAATTGGAAGATGGAAGAACATTGAGTGACTACAAT 187 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||||||| ||| ||||||||||||| || | || ||||| Sbjct 186 ATTCAAAAAGAATCTACCCTTCATTTAGTGTTGAGGCTCAGGGGAGG 140 Score = 129 bits (142), Expect = 5e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || ||||| |||||| | ||||| | ||||| || ||| | Sbjct 594 ATGCAAATTTTTGTGAAGACCTTAACGGGAAAAACTATCACCTTGGAAGTAGA-GCCTTC 536 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || | || ||| ||||||| |||||||||||||| || || || || Sbjct 535 AGACACAATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAGGGTATTCCACCAGACCA 476 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 || ||| | |||| | || |||||||| ||||||| |||| | || ||||| || Sbjct 475 ACAGAGATTAATTTTTGCTGGAAAACAACTAGAAGATGGCAGAACGCTTAGTGATTATAA 416 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 ||||||||| |||||||| | ||| | ||| | | || ||||| |||| Sbjct 415 TATTCAAAAGGAATCCACATTACATCTTGTGCTTCGTTTAAGAGGTGGAA 366 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| ||||| ||||| | || || | ||||| ||| | Sbjct 822 ATGCAGATCTTTGTCAAAACTTTAACTGGAAAGACCATAACTTTGGAAGTAGAATCTTCA 763 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || || ||||||| |||||||| ||||| || || || || Sbjct 762 GACACTATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCGGACCAA 703 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||| || || | | || ||||| | ||||||| |||| | || ||||||||| Sbjct 702 CAAAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGAGAACATTAAGTGATTACAAT 643 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 ||||| || || || || | ||| | || | ||||| |||||||||| Sbjct 642 ATTCAGAAGGAGTCTACATTACATCTTGTTCTTAGATTAAGAGGAGGAA 594 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 25286 CCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGC 25345 || ||||| ||||| || || | | || |||||||| ||||||| ||||| | ||| Sbjct 939 CCAGATCAACAAAGGCTTATATTTGCTGGTAAACAACTTGAAGATGGTAGAACATTGAGC 880 Query 25346 GATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| ||||| |||||||||||||| ||||| | || | | ||||| ||||| Sbjct 879 GATTATAATATACAAAAAGAATCCACGCTTCATCTTGTTCTTCGGTTGAGGGGAGG 824 >seq663341 Length=403 Score = 129 bits (142), Expect = 5e-25 Identities = 164/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | ||||| ||||| | || || ||| | || || | || || ||||| Sbjct 178 CATGCAAATCTTTGTGAAAACTCTTACGGGGAAAACTATTACCCTAGAGGTTGAAGCATC 237 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || |||||||| | |||||| |||||| |||||||||||||| || || || || Sbjct 238 TGACACTATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAGGGTATTCCACCAGACCA 297 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| ||| | |||| | || || ||||| ||||||| | | | | | || || || || Sbjct 298 GCAGAGATTAATTTTTGCTGGAAAGCAACTTGAAGATGGTCGTACTCTTAGTGACTATAA 357 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGA 25399 ||| || ||||||||||| | |||||||| | || ||||||||| Sbjct 358 TATCCAGAAAGAATCCACACTCCATTTAGTTCTGAGGTTGAGAGGA 403 Score = 98.7 bits (108), Expect = 9e-16 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || |||||||| | |||||| ||||| || ||||| || || || ||||||||| Sbjct 11 GACACTATCGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCACCCGATCAG 70 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | |||| | || || ||||| ||||||| | | | | || || ||||| Sbjct 71 CAGAGATTAATTTTTGCTGGAAAGCAACTAGAAGATGGTCGTACATTGAGTGACTACAAC 130 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || |||||||||||||| | |||||||| | | ||||||||||| Sbjct 131 ATCCAAAAAGAATCCACACTCCATTTAGTTCTGCGGTTGAGAGGAGG 177 >seq1135619 Length=547 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| ||||| ||||| | ||||| | ||||| ||| | Sbjct 143 ATGCAAATATTTGTCAAAACCTTAACTGGAAAGACCATCACTCTTGAAGTTGAACCTTCA 202 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || || | || || ||||| |||||||| || || || || || ||| Sbjct 203 GATACAATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGAATCCCACCAGACCAG 262 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | |||| | || || ||||| ||||||| | | | | || || ||||| Sbjct 263 CAGAGATTGATTTTTGCTGGAAAGCAACTTGAAGATGGTCGCACACTGAGTGACTACAAC 322 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAA 25404 || ||||| || ||||| |||||||||| || || ||||||||||||| Sbjct 323 ATCCAAAAGGAGTCCACTCTTCATTTAGTATTGAGGCTGAGAGGAGGAAA 372 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 || ||||| || || || ||||||||||| ||| | |||| | || || ||||| ||| Sbjct 8 GACAAAGAAGGCATTCCACCCGATCAGCAGAGATTGATTTTTGCTGGAAAGCAACTTGAA 67 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 |||| | | | | ||||||||||| || ||||| ||||| || | || || || | Sbjct 68 GATGGTCGCACACTTAGCGATTACAACATCCAAAAGGAATCTACGCTCCACTTGGTACTT 127 Query 25388 AGATTGAGAGGAGG 25401 |||||||||||||| Sbjct 128 AGATTGAGAGGAGG 141 >seq770237 Length=425 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || ||||| | ||||| ||||| || || || || | || || | ||||| || ||| Sbjct 51 AAAATGCAGATCTTTGTGAAAACTTTGACTGGGAAGACCATAACACTAGAAGTTGA-GCC 109 Query 25232 AAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | ||||| || || | || || ||| ||| |||||||| ||||| || || || Sbjct 110 TTCAGATACAATTGAAAATGTCAAGGCAAAGATTCAAGATAAAGAAGGTATCCCACCAGA 169 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 |||||||| | |||| | || ||||| || || |||| | | | |||| || || Sbjct 170 CCAGCAAAGGTTGATTTTTGCAGGAAAACAGCTTGAGGATGGGCGTACTCTCAGTGACTA 229 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||| |||||||||||||| | ||||||||||| || |||||||| || Sbjct 230 CAATATCCAAAAAGAATCCACTCTGCATTTAGTGTTGAGGTTGAGAGGGGG 280 >seq678478 Length=406 Score = 113 bits (124), Expect = 4e-20 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 25177 GCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGA 25236 |||| | || || ||||| | || |||||| | ||||| ||||||| ||||| || Sbjct 1 GCAAATTTTCGTCAAAACCCTTACAGGAAAAACAATCACCCTCGAAGTTGAAGCTTCAGA 60 Query 25237 TACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCA 25296 || || ||| | |||||| ||||| || ||||| || || || |||||||| || Sbjct 61 CACAATTGAGAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCACCCGATCAACA 120 Query 25297 AAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATAT 25356 ||| | |||| | || || ||||| ||||||| | | | | || || ||||| || Sbjct 121 GAGATTGATTTTTGCTGGAAAGCAACTAGAAGATGGTCGTACATTGAGTGACTACAACAT 180 Query 25357 TCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||| ||||| | |||||||| | | ||||||||||| Sbjct 181 CCAAAAAGAGTCCACACTCCATTTAGTTCTGCGGTTGAGAGGAGG 225 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| | || || ||| | || || | || || ||||| Sbjct 227 ATGCAAATCTTTGTGAAAACTCTTACGGGGAAAACTATTACCCTAGAGGTTGAAGCATCT 286 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || |||||||| | |||||| |||||| |||||||||||||| || || || ||| Sbjct 287 GACACTATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAGGGTATTCCACCAGACCAG 346 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | |||| | || || ||||| ||||||| | | | | | || || || ||| Sbjct 347 CAGAGATTAATTTTTGCTGGAAAGCAACTTGAAGATGGTCGCACTCTTAGTGACTATAAT 406 >seq242576 Length=334 Score = 107 bits (118), Expect = 2e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 25258 AAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAA 25317 ||||||| |||||||| ||||| || || ||||| ||||| || || | | || || Sbjct 328 AAAAATTCAGGATAAAGAAGGTATCCCACCAGATCAACAAAGGCTTATATTTGCTGGTAA 269 Query 25318 ACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCA 25377 |||||| ||||||| ||||| | |||||||| ||||| |||||||||||||| |||| Sbjct 268 ACAACTTGAAGATGGTAGAACATTGAGCGATTATAATATACAAAAAGAATCCACGCTTCA 209 Query 25378 TTTAGTGTTAAGATTGAGAGGAGG 25401 | | || | | ||||| ||||| Sbjct 208 TCTTGTTCTTCGGTTGAGGGGAGG 185 Score = 82.4 bits (90), Expect = 7e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| ||||| ||||| | || || | ||||| ||| | Sbjct 183 ATGCAGATCTTTGTCAAAACTTTAACTGGAAAGACCATAACTTTGGAAGTAGAATCGTCA 124 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || || ||||||| |||||||| ||||| || || || || Sbjct 123 GACACTATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCGGACCAA 64 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||| || || | | || ||||| | ||||||| |||| | || ||||||||| Sbjct 63 CAAAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGAGAACATTAAGTGATTACAAT 4 Query 25355 ATT 25357 ||| Sbjct 3 ATT 1 >seq1644865 Length=2180 Score = 89.7 bits (98), Expect = 4e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 110036 TATTCGCCTACACGTTTTTCGAAAAAATTAGTTTTGCCCTCGAGAGATATATTATTCATA 110095 ||||| ||||| | || || || ||||||||||| || ||||| || ||||| | ||| Sbjct 775 TATTCACCTACTCTCTTCTCAAAGAAATTAGTTTTCCCTTCGAGGGAAATATTCTCCATG 716 Query 110096 AACTCGAAAGGATTGACAGTGTTAAAGTGTTTGTCGTAGCCCAATTCGAATAGCAATCGA 110155 || || |||||||| || ||| |||| || || | ||||| || | || | || | Sbjct 715 AAGTCTAAAGGATTTTCAACTTTATAGTGCTTTTCACATCCCAACTCTATTAAAAGTCTA 656 Query 110156 TCCGCCACAAATTCAATATACT 110177 || || ||||||||||| |||| Sbjct 655 TCGGCGACAAATTCAATGTACT 634 >seq1605470 Length=1495 Score = 89.7 bits (98), Expect = 4e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 |||||||| || || || || || ||||| ||| | |||| | || || ||||| ||| Sbjct 21 GATAAAGAAGGAATCCCACCAGACCAGCAGAGATTGATTTTTGCTGGAAAGCAACTTGAA 80 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 |||| | | | | || || ||||| || ||||| || ||||| |||||||||| || Sbjct 81 GATGGTCGCACACTGAGTGACTACAACATCCAAAAGGAGTCCACTCTTCATTTAGTATTG 140 Query 25388 AGATTGAGAGGAGGAAA 25404 || ||||||||||||| Sbjct 141 AGGCTGAGAGGAGGAAA 157 >seq509544 Length=375 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 136767 ATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTCAATAGTAC 136826 ||| ||||| || |||||||| ||| ||| ||| | ||| || ||||| | ||| | ||| Sbjct 215 ATTGAGCGACTGACTCTGATCTATGAAAGCTCCTCTGTCGGCAGCCATCTCCAAAACTAC 156 Query 136827 TTTTTGCTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCGGAATTTCATC 136886 ||||| ||| ||||| | || || | | || ||| | |||| ||||||| || Sbjct 155 CTTTTGGGGAATCTCCCACACTGTCTTGTATAACTTCTTCAAATTGTCGGGAATTTGTTC 96 Query 136887 GATATTCTGTACAGATCCGTTGTT 136910 ||||| || ||||||||||||| Sbjct 95 TATATTTTGCCCAGATCCGTTGTT 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 435838906753920