Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq1488354 127 2e-24 seq770237 95.1 1e-14 seq1135619 93.3 3e-14 seq242576 93.3 3e-14 seq678478 91.5 1e-13 seq663341 89.7 4e-13 >seq1488354 Length=939 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| ||||| | ||||| || || ||||| ||||| |||||| Sbjct 367 AATGCAAATTTTTGTGAAAACTCTAACTGGTAAAACTATTACTTTGGAAGTAGAACCTTC 308 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || | | | | || ||| ||||||| || ||||| || | || || || Sbjct 307 TGACACCATAGAAAATGTCAAAGCAAAAATTCAGGATAAAGAGGGTATTCCACCAGACCA 248 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||||||||||| | ||| || |||||||| |||||| | ||| || | || ||||| Sbjct 247 ACAAAGGCTTATATTTGCTGGAAAACAATTGGAAGATGGAAGAACATTGAGTGACTACAA 188 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || |||||||||||||| || |||||||| |||||| | | ||||| Sbjct 187 TATTCAAAAAGAATCTACCCTTCATTTAGTGTTGAGGCTCAGGGGAGG 140 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| ||||| || ||||| |||||||| || ||||| |||| | Sbjct 822 ATGCAGATCTTTGTCAAAACTTTAACTGGAAAGACCATAACTTTGGAAGTAGAATCTTCA 763 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | || || ||||||| || |||||||| | || || ||| Sbjct 762 GACACTATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCGGACCAA 703 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||||||||| | ||| || ||||| || |||||| | ||| | | |||||||| Sbjct 702 CAAAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGAGAACATTAAGTGATTACAAT 643 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 || || || || |||||| ||||| | || | || ||| |||||||| Sbjct 642 ATTCAGAAGGAGTCTACATTACATCTTGTTCTTAGATTAAGAGGAGGA 595 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| || || || || || || || || ||| ||||| ||| || Sbjct 595 AATGCAAATTTTTGTGAAGACCTTAACGGGAAAAACTATCACCTTGGAAGTAGAGCCTTC 536 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || | ||| | |||||| ||||||| || ||||| || | || || || Sbjct 535 AGACACAATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAGGGTATTCCACCAGACCA 476 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| || | |||| ||| || |||||| |||||||| | ||| | | ||||| || Sbjct 475 ACAGAGATTAATTTTTGCTGGAAAACAACTAGAAGATGGCAGAACGCTTAGTGATTATAA 416 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 || ||||| ||||| ||| ||||| | || | | ||| |||| ||| Sbjct 415 TATTCAAAAGGAATCCACATTACATCTTGTGCTTCGTTTAAGAGGTGGA 367 Score = 87.8 bits (96), Expect = 1e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 106374 GATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGAT 106433 ||||||||||||||||| | ||| || |||||| | |||||| || ||| || ||||| Sbjct 936 GATCAACAAAGGCTTATATTTGCTGGTAAACAACTTGAAGATGGTAGAACATTGAGCGAT 877 Query 106434 TACAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || |||||||||||||| || || ||| | || | |||| | ||||| Sbjct 876 TATAATATACAAAAAGAATCCACGCTTCATCTTGTTCTTCGGTTGAGGGGAGG 824 >seq770237 Length=425 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 |||||||| || ||||| ||||| |||||||| |||||||| || | ||| || || Sbjct 51 AAAATGCAGATCTTTGTGAAAACTTTGACTGGGAAGACCATAACACTAGAAGTTGAGCCT 110 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 ||| | ||| | || || ||| ||| || |||||||| | || || Sbjct 111 TCAGATACAATTGAAAATGTCAAGGCAAAGATTCAAGATAAAGAAGGTATCCCACCAGAC 170 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 || |||||| | |||| ||| || ||||| | || ||| ||| | | || ||| Sbjct 171 CAGCAAAGGTTGATTTTTGCAGGAAAACAGCTTGAGGATGGGCGTACTCTCAGTGACTAC 230 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || ||||||||||| || || |||||||| |||||||| |||| || Sbjct 231 AATATCCAAAAAGAATCCACTCTGCATTTAGTGTTGAGGTTGAGAGGGGG 280 >seq1135619 Length=547 Score = 93.3 bits (102), Expect = 3e-14 Identities = 163/237 (69%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| ||||| || ||||| |||||||| || | ||| ||||| Sbjct 143 ATGCAAATATTTGTCAAAACCTTAACTGGAAAGACCATCACTCTTGAAGTTGAACCTTCA 202 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || || ||||| || |||||||| | || || || Sbjct 203 GATACAATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGAATCCCACCAGACCAG 262 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || || | |||| ||| || || ||| | |||||| | || || | || |||||| Sbjct 263 CAGAGATTGATTTTTGCTGGAAAGCAACTTGAAGATGGTCGCACACTGAGTGACTACAAC 322 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA---TAATGA 106493 || ||||| || || || || ||||||||||||||| | |||||||| |||||| Sbjct 323 ATCCAAAAGGAGTCCACTCTTCATTTAGTATTGAGGCTGAGAGGAGGAAATTAATGA 379 >seq242576 Length=334 Score = 93.3 bits (102), Expect = 3e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 106343 AAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAA 106402 ||||||| || |||||||| | || ||||||||||||||||| | ||| || || Sbjct 328 AAAAATTCAGGATAAAGAAGGTATCCCACCAGATCAACAAAGGCTTATATTTGCTGGTAA 269 Query 106403 ACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACA 106462 |||| | |||||| || ||| || ||||||| || |||||||||||||| || || || Sbjct 268 ACAACTTGAAGATGGTAGAACATTGAGCGATTATAATATACAAAAAGAATCCACGCTTCA 209 Query 106463 TTTAGTATTGAGGTTACGAGGAGG 106486 | | || | |||| | ||||| Sbjct 208 TCTTGTTCTTCGGTTGAGGGGAGG 185 >seq678478 Length=406 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 106262 GCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGA 106321 ||||||||| || ||||| | || || || || || ||| | ||| ||| | || Sbjct 1 GCAAATTTTCGTCAAAACCCTTACAGGAAAAACAATCACCCTCGAAGTTGAAGCTTCAGA 60 Query 106322 TTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACA 106381 | ||| | || ||| ||||| |||||||||||| | || |||||||| Sbjct 61 CACAATTGAGAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCACCCGATCAACA 120 Query 106382 AAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACAT 106441 || | |||| ||| || || ||| |||||||| | || || | || |||||||| Sbjct 121 GAGATTGATTTTTGCTGGAAAGCAACTAGAAGATGGTCGTACATTGAGTGACTACAACAT 180 Query 106442 ACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 |||||||| || ||||| |||||||| || |||| ||||||| Sbjct 181 CCAAAAAGAGTCCACACTCCATTTAGTTCTGCGGTTGAGAGGAGG 225 >seq663341 Length=403 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412 |||||||||||| | || ||||| || || | |||| ||| || || ||| ||||| Sbjct 44 GACAAAGAAGGCATTCCACCCGATCAGCAGAGATTAATTTTTGCTGGAAAGCAACTAGAA 103 Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| | || || | || |||||||| ||||||||||| ||||| |||||||| || Sbjct 104 GATGGTCGTACATTGAGTGACTACAACATCCAAAAAGAATCCACACTCCATTTAGTTCTG 163 Query 106473 AGGTTACGAGGAGG 106486 |||| ||||||| Sbjct 164 CGGTTGAGAGGAGG 177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394172532818048