Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1644865 349 5e-91 seq509544 89.7 7e-13 >seq1644865 Length=2180 Score = 349 bits (386), Expect = 5e-91 Identities = 558/799 (70%), Gaps = 8/799 (1%) Strand=Plus/Minus Query 39302 TCTTCTTGTGA---CATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAA 39358 ||||||| || |||||| || |||||| |||||||| || | ||||| || ||| Sbjct 808 TCTTCTTCGGAACTCATAACACCACATTTTTGATATTCACCTACTCTCTTCTCAAAGAAA 749 Query 39359 TTAGTTTTGCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAt 39418 |||||||| ||||| | || ||||| |||||||| || || ||||| | ||||| Sbjct 748 TTAGTTTTCCCTTCGAGGGAAATATTCTCCATGAAGTCTAAAGGATTTTCAACTTTATAG 689 Query 39419 ttttttttAAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTC 39478 | |||| | |||| || ||| | | |||||| || |||||||| ||||| |||| Sbjct 688 TGCTTTTCACATCCCAACTCTATTAAAAGTCTATCGGCGACAAATTCAATGTACTGTTTC 629 Query 39479 ATCATTTCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTT 39538 || | | |||||||||||| || || ||| || | || || |||| || |||| | Sbjct 628 ATTAATGTACAATTCATTCCAATTAGAGCAACGGGCAATGCATCTGTTAAGAATTCTTGT 569 Query 39539 TCGATGTCTACGGCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAAT 39598 || || ||||| ||||| ||||| || || || | ||| ||| || | Sbjct 568 TCAATTGAAACGGCGTCTGTAATTATTTCCGTGACAGTTTCCTTACTAGGTTTATTAACC 509 Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658 | ||| |||||||||||||| ||||| || ||| || || ||||| ||| || | | Sbjct 508 AGATGCTTAAACATTAAGCACGCGAAATCGGTATGAAGACCTTCATCCCTAGATATAAGT 449 Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 |||||| ||| || ||||| ||||| || || | ||| ||||||||||| || |||||| Sbjct 448 TCGTTACTAAAAGTAAGTCCTGGCATCAGTCCTCTCTTCTTGAGCCAAAAAATAGCAGCA 389 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA 39778 ||||||||| || || || ||||| || | ||||| ||||||| ||| || ||||| Sbjct 388 AAAGATCCACTGAAAAATATCCCTTCAACAGAGGCAAACGCAACAACTCTTTCGGCGTAA 329 Query 39779 ----CTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834 ||| | ||||| ||||| ||||| || |||||||| || ||||| || Sbjct 328 GAAGCTTCT-TCATTGCCAATCCAACATAAAGCCCAGTCGGCTTTCTTTTTGACACATGG 270 Query 39835 CATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATC 39894 | ||||| || || |||||||| | |||||| | | ||| | ||| ||||| Sbjct 269 GAGAGTTTCGATGGCGTTAAAGAGTTTCGTTTTTTCTTTAGGATCAGATATATAGGTATC 210 Query 39895 TATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAA 39954 || | | |||||||||||| || | |||||| ||| ||||| || |||||||| Sbjct 209 GATCAGTAAACTATACATTTCACTGTGAACGTTTTCGATCATAATCTGGAAACCGTAAAA 150 Query 39955 ACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCAC 40014 | |||||||||| || ||| | |||| || || || ||| |||| || || || || Sbjct 149 GAACCTTGCTTCAGGAACTTGAATCTCTTGGCAGAACCTCTCCACCAAGTTCTCGTTGAC 90 Query 40015 TATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGG 40074 |||||||| || ||||| ||||||| ||||| || |||| |||||| || Sbjct 89 AATTCCATCCGATGCAGCAAAGAATGCCAGAACATGGGAGATGAAATGACGTTCATCTGG 30 Query 40075 TGTCAATTTATTCCAGTCA 40093 | ||| ||||| ||| Sbjct 29 CTGAAGTTTGTTCCAATCA 11 >seq509544 Length=375 Score = 89.7 bits (98), Expect = 7e-13 Identities = 109/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500 |||| || ||||||||||| || || || || | |||| |||||||| |||| Sbjct 273 TCCAGCCATAGAAATGCATGGAGGTGAGCTTCCTATGATTTGGCGACGCTATATGTATAT 214 Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAA-TACTC 68559 | | ||| ||||| ||||| |||||||||||||| || || ||||| | | || ||| | Sbjct 213 TGAGCGACTGACTCTGATCTATGAAAGCTCCTCTGTCGGCAGCCATCTCCAAAACTAC-C 155 Query 68560 TTTTGAGGAATTTCCCAAATAGTCTT 68585 ||||| ||||| ||||| | ||||| Sbjct 154 TTTTGGGGAATCTCCCACACTGTCTT 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 672624909303840