Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1644865 183 2e-41 seq1483693 152 4e-32 seq1643672 118 8e-22 seq1643959 95.1 9e-15 >seq1644865 Length=2180 Score = 183 bits (202), Expect = 2e-41 Identities = 494/738 (67%), Gaps = 32/738 (4%) Strand=Plus/Plus Query 43850 GTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTT- 43908 ||| |||| || |||||||| || || || ||||| || || ||||| |||| Sbjct 57 GTTCTGGCATTCTTTGCTGCATCGGATGGAATTGTCAACGAGAACTTGGTGGAGAGGTTC 116 Query 43909 TGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGA 43968 ||| ||||| ||||| | || |||||| | | ||||| || || || ||| || || Sbjct 117 TGC-CAAGAGATTCAAGTTCCTGAAGCAAGGTTCTTTTACGGTTTCCAGATTATGATCGA 175 Query 43969 AAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGA 44028 ||| |||| |||||||| ||| | ||||| ||||| || || ||| | || Sbjct 176 AAACGTTCACAGTGAAATGTATAGTTTACTGATCGATACCTATATATCTGATCCTAAAGA 235 Query 44029 GAAGCATCGAT--TGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGA 44085 || | ||| | ||||| || || ||||| | || || | | ||| | ||||| || Sbjct 236 AAA--AACGAAACTCTTTAACGCCATCGAAACTCTCCCATGTG-TCAAAAAGAAAGCCGA 292 Query 44086 CTGGGCCCTTAAATGGATA---AATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTT 44142 |||||| | ||||| ||| | | | ||||| | ||| || |||| ||||| Sbjct 293 CTGGGCTTTATGTTGGATTGGCAATGAAGAAGCTTCTTACGCCGAAAGAGTTGTTGCGTT 352 Query 44143 TGCAGTTGTGGAAGGCATTTTCTTTTCAG--GATCGTTTGCGGCCATATTTTGGTTAAAG 44200 ||| ||| ||||| || || |||||| |||| ||||| || || |||||| | ||| Sbjct 353 TGCCTCTGTTGAAGGGATATT--TTTCAGTGGATCTTTTGCTGCTATTTTTTGGCTCAAG 410 Query 44201 AAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGC 44260 || |||| ||||||| || | || ||| || || | ||| | | |||||||| Sbjct 411 AAGAGAGGACTGATGCCAGGACTTACTTTTAGTAACGAACTTATATCTAGGGATGAAGGT 470 Query 44261 TTACATTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGT 44320 | ||| |||||| || ||||| | || |||| || | |||| ||| || Sbjct 471 CTTCATACCGATTTCGCGTGCTTAATGTTTAAGCATCT-GGTTA--ATAAACCTA---GT 524 Query 44321 AAGACAATT---ACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACA 44377 ||| || | || || || || ||| || || || ||||||||||| | ||| Sbjct 525 AAGGAAACTGTCACGGAAATAATTACAGACGCCGTTTCAATTGAACAAGAATTCTTAACA 584 Query 44378 ACAGCATTACCTGTAAATTTAATAGGAATGAA-TGAACTTTTGATGAACCAATATATTGA 44436 ||||| || || | |||| |||||||| || || || ||||| || || ||||| Sbjct 585 GATGCATTGCCCGTTGCTCTAATTGGAATGAATTGTAC-ATTAATGAAACAGTACATTGA 643 Query 44437 ATACATTGCAGATCGTTTACTTT---TGGAACTGGGTTGCGATAAACACTATATTGTACA 44493 || | || ||| | ||||| | || |||| || || || ||||||| || | Sbjct 644 ATTTGTCGCCGATAG---ACTTTTAATAGAGTTGGGATGTGAAAAGCACTATAAAGTTGA 700 Query 44494 AAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAA 44553 ||| || || || || ||||| |||||||| | ||||| ||||| || || ||||| || Sbjct 701 AAATCCTTTAGACTTCATGGAGAATATTTCCCTCGAAGGGAAAACTAATTTCTTTGAGAA 760 Query 44554 ACGCGTTGGAGAATATCA 44571 | || || |||||||| Sbjct 761 GAGAGTAGGTGAATATCA 778 >seq1483693 Length=927 Score = 152 bits (168), Expect = 4e-32 Identities = 335/501 (67%), Gaps = 6/501 (1%) Strand=Plus/Minus Query 19428 TCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAA 19487 ||| ||||| ||||||||||| ||| ||||| |||| |||||||| |||| |||| ||| Sbjct 653 TCCTAAAATCGTAAATGGTCCAGAAGTCTTAGATAAGTATGTAGGCGAATCTGAAGCAAA 594 Query 19488 TGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTC 19547 ||| | || | ||||| || |||||||| || | ||||| | || | || | Sbjct 593 TGTGAGGCGGCTTTTTGCAGAAGCTGAAGAGGAGGAGAAACGAATGGGTCCGAACTCTGG 534 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCT---GG 19604 | ||||| || ||| | ||||| | || || || |||||||| ||||| ||| | Sbjct 533 ACTTCACATAATCATATTCGATGAGATCGATGCTATTTGTAAGCAGAGAGGCTCTGTAGC 474 Query 19605 TGTAAA---TGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGT 19661 || ||| |||||| | || ||||| || || ||| | || ||||| | || || || Sbjct 473 TGGAAACACTGGAGTCAACGATACTGTAGTTAACCAATTACTATCAAAGATTGATGGAGT 414 Query 19662 TAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAG 19721 | || | ||||||||| | || ||||| |||||||| ||| ||| | || || Sbjct 413 GGAGCAGTTAAATAATATTCTGGTCATTGGAATGACTAACAGAAAGGATATGATCGATGA 354 Query 19722 CGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATG 19781 || || | ||||| || || || ||||| | | ||||||| | || || ||| Sbjct 353 AGCTCTACTTCGACCTGGACGATTAGAAATTCAAGTAGAAATTAGTCTTCCAGACGAACA 294 Query 19782 TGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTTAAA 19841 ||||| || || ||| | || || | || || | ||||| | ||||| ||| | Sbjct 293 AGGACGAGTAGATATTCTGAAAATCAAAACCTCTAAGATGCGCGAGCATAACAAATTAGA 234 Query 19842 TGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATAGCGGCGCAGAACT 19901 || || || | | |||||| ||| | || || |||| ||| || ||| | Sbjct 233 CCGTGACGTCGACTTGGCAGAAATCGCATCCTTAACGAAGAACTTCTCCGGTGCCGAATT 174 Query 19902 TGAGGGATTAGTGAGGGCCGC 19922 || || ||||| | ||||| Sbjct 173 AGAAGGTTTAGTTAAAGCCGC 153 >seq1643672 Length=2139 Score = 118 bits (130), Expect = 8e-22 Identities = 191/275 (69%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 40692 TTTCCGTTGCTAACTACaaaaaaaaTGTTTTGGAAAGGCATTGCAGAAGAACTGTTATGG 40751 ||||| || || || || || | | ||||||||| ||| | ||||| | ||||| Sbjct 514 TTTCCATTACTTACAACCAAGAGAGTGTTTTGGAGAGGAGTGTTTGAAGAGTTACTATGG 573 Query 40752 TTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTGCACATTTGGAAT 40811 ||||| | || | || ||||| || || || || | |||||| || || ||| || Sbjct 574 TTTATTAGGGGATCAACAAATGCCAAAGAACTAAGTGAGAAAGGAGTTCATATATGGGAT 633 Query 40812 GCGCACAGTTCTAAAACATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAGGTGAT 40871 || ||| | | || | | ||| |||| || ||| || || ||||| ||| Sbjct 634 CAAAACTCTTCCAGAGAATTTCTTGATAGTTTAGGTTTTACAGACAGAGAGGAAGGAGAT 693 Query 40872 CTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTATGTAC 40931 | |||||||| ||||| ||||||| | |||||||||||||| ||||| |||| || Sbjct 694 TTGGGTCCTGTATATGGGTTTCAGTGGAGACATTTTGGAGCATCATATGTTGATATGCAC 753 Query 40932 TCTGATTATACCAATAAAGGAATGGATCAATTACA 40966 ||||||| | || |||||||| ||||| ||||| Sbjct 754 ACTGATTACAAAAACAAAGGAATTGATCAGTTACA 788 >seq1643959 Length=2149 Score = 95.1 bits (104), Expect = 9e-15 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 41049 ATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCA 41108 ||||| | || || ||||| | | |||||||||||||| |||||| ||||| || Sbjct 1511 ATGGCTCTCCCTCCATGTCACTGTATGTGTCAGTTTTACGTCGCCAATGGAGAACTATCT 1452 Query 41109 TGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGT 41168 |||||| | |||||| | || | || | ||||| ||||| ||||||||||| || ||| Sbjct 1451 TGTCAACTTTATCAACGTTCTGCAGATGTTGGACTTGGGGTACCGTTTAACATTGCTAGT 1392 Query 41169 TATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203 ||||| || | || | ||||| ||| | || || Sbjct 1391 TATGCCTTGTTGACTCACATGATCGCAAATGTAAC 1357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 389397743053780