Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq663341 127 2e-24 seq1488354 125 6e-24 seq770237 113 4e-20 seq678478 113 4e-20 seq252373 104 2e-17 >seq663341 Length=403 Score = 127 bits (140), Expect = 2e-24 Identities = 163/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 27023 TCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCAT 27082 ||| | ||||| || || ||||| | || || ||||| || ||||| ||||| || | Sbjct 403 TCCTCTCAACCTCAGAACTAAATGGAGTGTGGATTCTTTCTGGATATTATAGTCACTAAG 344 Query 27083 GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCAC 27142 | || | ||||| || || || || || |||| | | ||| || || || || | Sbjct 343 AGTACGACCATCTTCAAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGGTCTGGTGGAAT 284 Query 27143 ACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTC 27202 |||||||||||| ||| || ||| | |||| | |||||| | |||||||| || Sbjct 283 ACCCTCTTTATCTTGGATTTTTGCTTTTACATTTTCGATAGTGTCAGATGCTTCAACCTC 224 Query 27203 TAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| || |||| ||| ||||| ||||||||||||||||||||||| Sbjct 223 TAGGGTAATAGTTTTCCCCGTAAGAGTTTTCACAAAGATTTGCAT 179 >seq1488354 Length=939 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | | || ||| || ||||| | ||||| |||||||||||||||||||| ||| Sbjct 140 CCTCCCCTGAGCCTCAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTC 199 Query 27081 -ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 ||||| | | ||||| | ||||| || || | || || | ||||| || || || Sbjct 200 AATGTT-CTTCCATCTTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGG 258 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||||||||| || || ||| | |||||| ||||| | | ||| || Sbjct 259 AATACCCTCTTTATCCTGAATTTTTGCTTTGACATTTTCTATGGTGTCAGAAGGTTCTAC 318 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| | ||| |||| ||| || || |||||||||||||| |||||||| Sbjct 319 TTCCAAAGTAATAGTTTTACCAGTTAGAGTTTTCACAAAAATTTGCAT 366 Score = 102 bits (112), Expect = 7e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC-TCATGTTGCGCTCGTCTTCGAGCT 27102 |||||| ||||| || || ||||||||||| || | | ||||| | | | ||||| | || Sbjct 619 ATGTAATGTAGACTCCTTCTGAATATTGTAATCACTTAATGTT-CTCCCATCTTCCAACT 677 Query 27103 GTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCT 27162 |||| || || | || || | ||||| ||||| || | ||| |||||||| || | Sbjct 678 GTTTCCCTGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATACCTTCTTTATCCTGAATTT 737 Query 27163 TGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCG 27222 | || | |||| | |||||||| | ||| ||||| | |||||| | || || | Sbjct 738 TTGCCTTAACATTTTCAATAGTGTCTGAAGATTCTACTTCCAAAGTTATGGTCTTTCCAG 797 Query 27223 TCAGAGTTTTCACAAAGATTTGCAT 27247 | | |||||| |||||||| ||||| Sbjct 798 TTAAAGTTTTGACAAAGATCTGCAT 822 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCA-TGTTGCGCTCGTCTTCGAGCT 27102 |||||| || || || ||||||||||| || || || | ||| || | ||||| || | Sbjct 391 ATGTAATGTGGATTCCTTTTGAATATTATAATCACTAAGCGTTCTGC-CATCTTCTAGTT 449 Query 27103 GTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCT 27162 |||| || || |||| | | |||||| || || || | |||||||||||| || | Sbjct 450 GTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCCTCTTTATCCTGAATTT 509 Query 27163 TGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCG 27222 | ||||| |||| | ||||||| | || ||||| | || |||| ||| |||| Sbjct 510 TTGCTTTCACATTTTCAATTGTGTCTGAAGGCTCTACTTCCAAGGTGATAGTTTTTCCCG 569 Query 27223 TCAGAGTTTTCACAAAGATTTGCAT 27247 | | || |||||||| |||||||| Sbjct 570 TTAAGGTCTTCACAAAAATTTGCAT 594 >seq770237 Length=425 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||||| ||| || ||||| | || || |||||||| ||||||||||| || Sbjct 280 CCCCCTCTCAACCTCAACACTAAATGCAGAGTGGATTCTTTTTGGATATTGTAGTCACTG 221 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | ||| | || || |||||||| || || |||| | | || || || || || Sbjct 220 AGAGTACGCCCATCCTCAAGCTGTTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGTGGG 161 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| |||||||| ||||| || | |||| | || |||| | |||||| Sbjct 160 ATACCTTCTTTATCTTGAATCTTTGCCTTGACATTTTCAATTGTATCTGAAGGCTCAACT 101 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| ||||| | || || |||| ||||||||||||||| ||||| Sbjct 100 TCTAGTGTTATGGTCTTCCCAGTCAAAGTTTTCACAAAGATCTGCAT 54 >seq678478 Length=406 Score = 113 bits (124), Expect = 4e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 27068 ATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTG 27127 ||| ||||| || | |||| | ||||| || || || || || |||| | | ||| Sbjct 406 ATTATAGTCACTAAGAGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATTAATCTCTG 347 Query 27128 TTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTC 27187 || || || || | |||||||||||| ||| || ||| | |||| | |||||| Sbjct 346 CTGGTCTGGTGGAATACCCTCTTTATCTTGGATTTTTGCTTTTACATTTTCGATAGTGTC 287 Query 27188 TGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | |||||||| ||||| || |||| ||| ||||| ||||||||||||||||||||||| Sbjct 286 AGATGCTTCAACCTCTAGGGTAATAGTTTTCCCCGTAAGAGTTTTCACAAAGATTTGCAT 227 Query 27248 AGCTGCT 27254 | || || Sbjct 226 ACCTCCT 220 Score = 104 bits (114), Expect = 2e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | |||||||| || ||||| | || || |||||||| || |||||||| ||| Sbjct 225 CCTCCTCTCAACCGCAGAACTAAATGGAGTGTGGACTCTTTTTGGATGTTGTAGTCACTC 166 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | ||||| || || || || || |||| | | ||||||||| || || Sbjct 165 AATGTACGACCATCTTCTAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCGGGTGGA 106 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || ||||| || ||| || ||| | | || | ||||||| ||||||||| Sbjct 105 ATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTCTCAATTGTGTCTGAAGCTTCAACT 46 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGC 27245 || || || || | ||| || || || ||||| || || |||||| Sbjct 45 TCGAGGGTGATTGTTTTTCCTGTAAGGGTTTTGACGAAAATTTGC 1 >seq252373 Length=335 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCA-TGTTGCGCTCGTCTT 27096 ||| |||||||| ||| | ||||| ||||||||||| ||| || |||| ||| | |||| Sbjct 46 TACTAAATGTAAAGTACACTCTTTCTGAATATTGTAATCGGACAGTGTT-CGCCCATCTT 104 Query 27097 CGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGG 27156 | | |||||| || || | || | |||||||| || || || | || |||||||| Sbjct 105 CCAACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATTCCTTCTTTATCTT 164 Query 27157 CGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATT 27216 || || || | |||| | || || | || ||||| ||||||||||||| | Sbjct 165 GAATTTTAGCCTTTACATTTTCAATGGTATCACTTGCCTCAACCTCTAGAGTTATAGTCT 224 Query 27217 TGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || |||| ||| || || || |||||||| Sbjct 225 TCCCAGTCAAAGTCTTAACGAAAATTTGCAT 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 416319029794272