Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1644865 114 1e-20 >seq1644865 Length=2180 Score = 114 bits (126), Expect = 1e-20 Identities = 472/725 (65%), Gaps = 16/725 (2%) Strand=Plus/Plus Query 94528 CTGGCATTCTTTGCTGGATCCGATGGAATTGTTTTTGAGAATATCAATAACAACTT-TGC 94586 |||||||||||||||| ||| ||||||||||| ||||| | | | || ||| Sbjct 60 CTGGCATTCTTTGCTGCATCGGATGGAATTGTCAACGAGAACTTGGTGGAGAGGTTCTGC 119 Query 94587 TGATGAGGTGCAATCCTCTGAAGCGAGATCCTTCTATGCGTATCAGTGTCATAAT-GAAA 94645 | ||| | ||| ||||||| || | ||| || | | ||| | || || |||| Sbjct 120 CAA-GAGATTCAAGTTCCTGAAGCAAGGTTCTTTTACGGTTTCCAGATT-ATGATCGAAA 177 Query 94646 TGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGA 94705 || || | || | || ||| ||| || || | ||||| ||| | || | Sbjct 178 ACGTTCACAGTGAAATGTATAGTTTACTGATCGATACCTATATATCTGATCCTAAAGAAA 237 Query 94706 AGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGG 94765 | | | | |||||| | |||||| |||| | || ||| | |||||||||| || |||| Sbjct 238 AAACGAAACTCTTTAACGCCATCGAAACTCTCCCATGTGTCAAAAAGAAAGCCGACTGGG 297 Query 94766 CTATGAAGTGGTTTGATACA-AAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCG 94824 || | ||| ||| | ||| || ||| | || || || | | || ||||| Sbjct 298 CTTTATGTTGGATTGGCAATGAAGAAGC-TTCTTACGCCGAAAGAGTTGTTGCGTTTGCC 356 Query 94825 TGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCG 94883 | |||||| || || || ||| ||| || || ||| ||||||| ||||||||||||| | Sbjct 357 TCTGTTGAAGGGATATTTTTCAGTGGATCTTT-TGCTGCTATTTTTTGGCTCAAGAAGAG 415 Query 94884 AGGTCTCATGCCAGGTCTCTGCTTCT-CCAACGAGCTTATCTCTCGTGACGAGGGACTCC 94942 ||| || |||||||| || | ||| | ||||| ||||| ||| | || || || || | Sbjct 416 AGGACTGATGCCAGGACT-TACTTTTAGTAACGAACTTATATCTAGGGATGAAGGTCTTC 474 Query 94943 ACCAAGAGTTTGCG-GTGGAACTTTTCAAATTAT-TGCGTATTAAACCAACGACTGAGAC 95000 | || || ||| | || ||| || || || || |||||| | | || || Sbjct 475 ATACCGATTTCGCGTGCTTAATGTTT--AAGCATCTGGTTAATAAACCTAGTAAGGAAAC 532 Query 95001 TATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAAGGATTCATATTGGATGCCCT 95060 | | || ||| || |||||| ||||| ||| |||| || ||||| | Sbjct 533 TGTCACGGAAATAATTACAGACGCCGTTTCAATTGAACAAGAATTCTTAACAGATGCATT 592 Query 95061 TCCATGCGCTCTCATCGGTATGAATTCTGAAAAAATGTCTGAATATATTGAGTATGTATC 95120 || ||||| || || ||||||| | | |||| | || ||||| | ||| | Sbjct 593 GCCCGTTGCTCTAATTGGAATGAATTGTACATTAATGAAACAGTACATTGAATTTGTCGC 652 Query 95121 TGATAGATTGTTGAAGCAGATCGG-GGTGCCTCCAATTTGGAACTCCAAGAATCCATTTG 95179 |||||| | || | || | || ||| | | || | || ||||| || | Sbjct 653 CGATAGACTTTTAATAGAGTTGGGATGTGAAAAGCACTATAAAGTTGAA-AATCCTTTAG 711 Query 95180 ACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGTTGGGG 95239 ||||||||||||| ||| |||||| ||||| || || ||||| || ||||| || || | Sbjct 712 ACTTCATGGAGAATATTTCCCTCGAAGGGAAAACTAATTTCTTTGAGAAGAGAGTAGGTG 771 Query 95240 ACTAT 95244 | ||| Sbjct 772 AATAT 776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571132212457440