Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq663341 174 2e-38 seq1135619 168 7e-37 seq678478 145 9e-30 seq252373 143 3e-29 seq1488354 138 1e-27 seq770237 138 1e-27 seq1605470 122 1e-22 seq1656961 116 4e-21 seq1409350 102 9e-17 seq242576 96.9 4e-15 seq123891 91.5 2e-13 >seq663341 Length=403 Score = 174 bits (192), Expect = 2e-38 Identities = 164/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| || || ||||| || || |||||||| || |||||||| || | Sbjct 179 ATGCAAATCTTTGTGAAAACTCTTACGGGGAAAACTATTACCCTAGAGGTTGAAGCATCT 238 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| | || || ||||| || || || ||||| ||||| ||||||||| Sbjct 239 GACACTATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAGGGTATTCCACCAGACCAG 298 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | ||||||||||||| |||||||| || |||| |||||| || ||||||||| Sbjct 299 CAGAGATTAATTTTTGCTGGAAAGCAACTTGAAGATGGTCGTACTCTTAGTGACTATAAT 358 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 |||| || |||||||| || ||| |||| Sbjct 359 ATCCAGAAAGAATCCACACTCCATTTAGT 387 Score = 111 bits (122), Expect = 2e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 27477 AAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAAT 27536 |||| | || |||||||| || ||||| || || ||||| || || |||||| | |||| Sbjct 22 AAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCACCCGATCAGCAGAGATTAAT 81 Query 27537 TTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGA 27596 ||||||||| |||||||| || |||| |||||| | ||||| || ||||||| || Sbjct 82 TTTTGCTGGAAAGCAACTAGAAGATGGTCGTACATTGAGTGACTACAACATCCAAAAAGA 141 Query 27597 ATCCACTCTTCATCTAGTCTTGCG 27620 |||||| || ||| |||| |||| Sbjct 142 ATCCACACTCCATTTAGTTCTGCG 165 >seq1135619 Length=547 Score = 168 bits (186), Expect = 7e-37 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| |||||||| || | || || ||||| || |||||||| ||||| | Sbjct 143 ATGCAAATATTTGTCAAAACCTTAACTGGAAAGACCATCACTCTTGAAGTTGAACCTTCA 202 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| | ||||||||||| || || || || ||||| || ||||||||| Sbjct 203 GATACAATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGAATCCCACCAGACCAG 262 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | ||||||||||| |||||||| || |||| ||| || || ||||| || Sbjct 263 CAGAGATTGATTTTTGCTGGAAAGCAACTTGAAGATGGTCGCACACTGAGTGACTACAAC 322 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| |||||||||||| |||| ||| Sbjct 323 ATCCAAAAGGAGTCCACTCTTCATTTAGTATTG 355 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/118 (77%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 27492 AATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCA 27551 ||| || ||||| || || ||||| || || |||||| | | ||||||||||| ||||| Sbjct 1 AATCCAAGACAAAGAAGGCATTCCACCCGATCAGCAGAGATTGATTTTTGCTGGAAAGCA 60 Query 27552 ACTCGAGGATGATCGTAC-CCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 ||| || |||| ||| || | |||| || || || ||||||||||||| || || || Sbjct 61 ACTTGAAGATGGTCGCACACTTAGC-GATTACAACATCCAAAAGGAATCTACGCTCCA 117 >seq678478 Length=406 Score = 145 bits (160), Expect = 9e-30 Identities = 140/180 (78%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| || || ||||| || || |||||||| || |||||||| || | Sbjct 227 ATGCAAATCTTTGTGAAAACTCTTACGGGGAAAACTATTACCCTAGAGGTTGAAGCATCT 286 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| | || || ||||| || || || ||||| ||||| ||||||||| Sbjct 287 GACACTATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAGGGTATTCCACCAGACCAG 346 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | ||||||||||||| |||||||| || |||| ||| || || ||||||||| Sbjct 347 CAGAGATTAATTTTTGCTGGAAAGCAACTTGAAGATGGTCGCACTCTTAGTGACTATAAT 406 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467 |||||| || ||||| || ||||| || || || || || || || ||||| | || Sbjct 1 GCAAATTTTCGTCAAAACCCTTACAGGAAAAACAATCACCCTCGAAGTTGAAGCTTCAGA 60 Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527 | |||| ||| | || |||||||| || ||||| || || ||||| || || || || Sbjct 61 CACAATTGAGAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCACCCGATCAACA 120 Query 27528 GCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGT 27587 | | | ||||||||||| |||||||| || |||| |||||| | ||||| || | Sbjct 121 GAGATTGATTTTTGCTGGAAAGCAACTAGAAGATGGTCGTACATTGAGTGACTACAACAT 180 Query 27588 CCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620 |||||| || ||||| || ||| |||| |||| Sbjct 181 CCAAAAAGAGTCCACACTCCATTTAGTTCTGCG 213 >seq252373 Length=335 Score = 143 bits (158), Expect = 3e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || |||||||| || || ||||| | || || |||||||| ||||| ||||||||| || Sbjct 258 ATCATGCAAATTTTCGTTAAGACTTTGACTGGGAAGACTATAACTCTAGAGGTTGAGGCA 199 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 |||||| ||||| |||| | |||||||||||||| || || || |||||||| || ||| Sbjct 198 AGTGATACCATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGAATTCCCCCTGAC 139 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || ||||| | || |||||||| || || | || |||| || || || | || || Sbjct 138 CAACAGCGATTGATCTTTGCTGGCAAACAGTTGGAAGATGGGCGAACACTGTCCGATTAC 79 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 ||| | || || || | ||| | ||| |||| Sbjct 78 AATATTCAGAAAGAGTGTACTTTACATTTAGT 47 >seq1488354 Length=939 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| | || || || ||||| || | || || ||| | Sbjct 595 AATGCAAATTTTTGTGAAGACCTTAACGGGAAAAACTATCACCTTGGAAGTAGAGCCTTC 536 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| |||| |||| || ||||||||||| || ||||| ||||| |||||||| Sbjct 535 AGACACAATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAGGGTATTCCACCAGACCA 476 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | ||||||||||||| || ||||| || |||| | || || || ||||| Sbjct 475 ACAGAGATTAATTTTTGCTGGAAAACAACTAGAAGATGGCAGAACGCTTAGTGATTATAA 416 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | | |||||||||||||| | ||||| || | ||| | | |||||| Sbjct 415 TATTCAAAAGGAATCCACATTACATCTTGTGCTTCGTTTAAGAGGTGGA 367 Score = 125 bits (138), Expect = 8e-24 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| || || || || || || ||||||||| | || || || | Sbjct 367 AATGCAAATTTTTGTGAAAACTCTAACTGGTAAAACTATTACTTTGGAAGTAGAACCTTC 308 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| | |||| | || || ||||||||||| || ||||| ||||| |||||||| Sbjct 307 TGACACCATAGAAAATGTCAAAGCAAAAATTCAGGATAAAGAGGGTATTCCACCAGACCA 248 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | || || |||||||| || ||| | || |||| | || | ||||| || Sbjct 247 ACAAAGGCTTATATTTGCTGGAAAACAATTGGAAGATGGAAGAACATTGAGTGACTACAA 188 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | | ||||| ||||| || |||||| |||| ||| Sbjct 187 TATTCAAAAAGAATCTACCCTTCATTTAGTGTTG 154 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || | || || ||||| || ||| | || || || || Sbjct 822 ATGCAGATCTTTGTCAAAACTTTAACTGGAAAGACCATAACTTTGGAAGTAGAATCTTCA 763 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||| ||||||||||| || || || || || || ||||| Sbjct 762 GACACTATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCGGACCAA 703 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || ||||| || || || | || |||| | || || || || ||| Sbjct 702 CAAAGGCTTATCTTTGCAGGGAAACAGTTGGAAGATGGGAGAACATTAAGTGATTACAAT 643 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | || ||||| || || | ||||| || Sbjct 642 ATTCAGAAGGAGTCTACATTACATCTTGT 614 >seq770237 Length=425 Score = 138 bits (152), Expect = 1e-27 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| || || | || || ||||| || || || || |||||| | Sbjct 53 AATGCAGATCTTTGTGAAAACTTTGACTGGGAAGACCATAACACTAGAAGTTGAGCCTTC 112 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| |||| |||| | ||||| || ||||| || || || || || || |||||||| Sbjct 113 AGATACAATTGAAAATGTCAAGGCAAAGATTCAAGATAAAGAAGGTATCCCACCAGACCA 172 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | | |||||||| || || || || ||||||| ||||| || ||||| || Sbjct 173 GCAAAGGTTGATTTTTGCAGGAAAACAGCTTGAGGATGGGCGTACTCTCAGTGACTACAA 232 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | ||||||| ||||||||||| ||| |||| ||| Sbjct 233 TATCCAAAAAGAATCCACTCTGCATTTAGTGTTG 266 Score = 102 bits (112), Expect = 9e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| || || | || || ||||| || || ||||| ||||| || Sbjct 282 ATGCAAATCTTTGTGAAAACTTTGACTGGTAAGACCATCACCCTTGAAGTTGAAGCATCA 341 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||||||||| || ||||| || || ||||| || || ||| Sbjct 342 GACACGATTGAGAATGTTAAGGCTAAAATCCAAGACAAAGAAGGCATTCCACCCGATCAG 401 Query 27526 CAGCGTCTAATTTTTGCTGGTAAG 27549 ||| | ||||||||||||| ||| Sbjct 402 CAGAGATTAATTTTTGCTGGAAAG 425 >seq1605470 Length=1495 Score = 122 bits (134), Expect = 1e-22 Identities = 108/135 (80%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||||||||||| || || || || ||||| || |||||||||||| | | ||||||||| Sbjct 6 AAGGCTAAAATCCAAGATAAAGAAGGAATCCCACCAGACCAGCAGAGATTGATTTTTGCT 65 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 || |||||||| || |||| ||| || || ||||| || |||||||||| |||||| Sbjct 66 GGAAAGCAACTTGAAGATGGTCGCACACTGAGTGACTACAACATCCAAAAGGAGTCCACT 125 Query 27604 CTTCATCTAGTCTTG 27618 |||||| |||| ||| Sbjct 126 CTTCATTTAGTATTG 140 >seq1656961 Length=2936 Score = 116 bits (128), Expect = 4e-21 Identities = 141/191 (74%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| || ||| | || || || || ||||||||||| |||||| | Sbjct 2807 ATGCAGATCTTTGTTAAAACGTTAACTGGTAAAACCATTACTCTTGAAGTTGAGGCTTCA 2748 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| | || || |||||||| || ||||| ||||| ||||| ||||| Sbjct 2747 GATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAA 2688 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | |||| || || || || ||||| || |||| || ||||| | || || || Sbjct 2687 CAAAGATTAATCTTCGCAGGAAAACAACTTGAAGATGGGCGAACCCTCTCTGATTACAAC 2628 Query 27586 GTCCA-AAAGG 27595 |||| ||||| Sbjct 2627 ATCCAGAAAGG 2617 >seq1409350 Length=781 Score = 102 bits (112), Expect = 9e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 80944 GTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGG 81003 ||||| || |||||||| ||||||| ||| || |||| ||||| |||| ||| |||||| Sbjct 182 GTAAATTCCACGATTTCTGTGCACAGATTGGAGCACTTTATTGTGCCCAAGTTATTCTGG 241 Query 81004 TTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTG 81062 || ||| |||||||||||||||||| |||| ||||| || ||||| || | ||| Sbjct 242 TTGCTCTTCCGGTTGCAAGCGTCCTTGTACAACATATACGGAGTCCCGGTTTCAATCTG 300 >seq242576 Length=334 Score = 96.9 bits (106), Expect = 4e-15 Identities = 102/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||||| ||||||||||| || || || || || ||||| || || | || || |||||| Sbjct 333 AAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCAGATCAACAAAGGCTTATATTTGCT 274 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCAC 27602 ||||| ||||| || |||| | | || | ||| || |||||| | ||||| |||||||| Sbjct 273 GGTAAACAACTTGAAGATGGTAGAACATTGAGC-GATTATAATATACAAAAAGAATCCAC 215 Query 27603 TCTTCATCTAGT 27614 |||||||| || Sbjct 214 GCTTCATCTTGT 203 >seq123891 Length=317 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| | || || || ||||| ||| | ||||| || | | Sbjct 140 ATGCAGATTTTTGTAAAGACATTGACTGGTAAAACTATAACTTTGGAGGTAGAACCTTCT 81 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| |||| | ||||| ||||||||||| || || || || || ||||| || Sbjct 80 GATACCATTGAAAATGTAAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCAGATCAA 21 Query 27526 CAGCGTCTAATTTTTGCTGG 27545 || | || || |||||||| Sbjct 20 CAAAGGCTTATATTTGCTGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 558451108902720