Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq1612047 104 3e-17 >seq1612047 Length=1561 Score = 104 bits (114), Expect = 3e-17 Identities = 172/241 (71%), Gaps = 7/241 (3%) Strand=Plus/Plus Query 89183 ATGGAAAGAATTATTCGATCCTGTCTTGCATATAGAACTTAGGAGGTGGGCTGATATATT 89242 ||||||| || | |||||||| |||||||| || || |||||||| || | Sbjct 1282 ATGGAAAAAAAGAGGTGATCCTGTAAAACATATAGAGCTCAGAGAATGGGCTGACATTCT 1341 Query 89243 TATTATCGCGCCACTAACGGCTAATACTCTAGCGAAGATAGCTAATGGTATATGCGACAA 89302 |||| | || ||| | |||||||| || || || || ||| | || | || ||||| Sbjct 1342 TATTTTAGCTCCATTGGATGCTAATACACTTGCTAAAATTGCTCAAGGCCTTTGTGACAA 1401 Query 89303 CTTACTAACTTCTATAGTTAGGGCATGGGATAT-ATCAAAGCCCCTTAT-TTTTTGTCCT 89360 ||| |||| | || || | || ||| |||| | ||| || ||| ||||||||| Sbjct 1402 TTTATTAACATGCATTGTGCGAGCCTGGAATATGAGGAAA--CCTATATATTTTTGTCCA 1459 Query 89361 GCCATGAATACTCTAATGTGGGAACATCCTATTACTGAATCA-CAAATAGATACTCTTAA 89419 ||||||||||| | ||||| ||||||||| |||| ||||| || ||| ||| |||||| Sbjct 1460 GCCATGAATACCCAAATGTATGAACATCCTTTTAC-CAATCAGCATATAAATA-TCTTAA 1517 Query 89420 A 89420 | Sbjct 1518 A 1518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590637987013440