Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1488354 134 9e-27 seq1656961 120 2e-22 seq1135619 107 1e-18 seq252373 95.1 7e-15 seq770237 91.5 9e-14 seq663341 89.7 3e-13 seq1605470 87.8 1e-12 >seq1488354 Length=939 Score = 134 bits (148), Expect = 9e-27 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | ||| | ||| | ||| | ||| ||||||||||| |||||||| | Sbjct 368 CCACCTCTTAAACGAAGCACAAGATGTAATGTGGATTCCTTTTGAATATTATAATCACTA 427 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | ||||| |||||||| || ||||| ||||| | ||||||||| || || Sbjct 428 AGCGTTCTGCCATCTTCTAGTTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGTGGA 487 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| || || ||| ||||| ||| || | |||||||||| ||| || Sbjct 488 ATACCCTCTTTATC-CTGAATTTTTGCTTTCACATTTTCAATTGTGTCTGAAGGCTCTAC 546 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| ||| || ||||| || ||||| || ||||||||||| ||||| Sbjct 547 TTCCAAGGTGATAGTTTTTCCCGTTAAGGTCTTCACAAAAATTTGCAT 594 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || || | |||||| ||||| || || || |||||||| || || || Sbjct 140 CCTCCCCTGAGCCTCAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTC 199 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||||| | ||||| | |||||| || |||||||| | | |||||||| || || Sbjct 200 AATGTTCTTCCATCTTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGGA 259 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | ||||| || || ||| ||||| ||| || | || ||||| || || Sbjct 260 ATACCCTCTTTATCC-TGAATTTTTGCTTTGACATTTTCTATGGTGTCAGAAGGTTCTAC 318 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || |||||||| |||| |||||||||||||| ||||| Sbjct 319 TTCCAAAGTAATAGTTTTACCAGTTAGAGTTTTCACAAAAATTTGCAT 366 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| ||||| || ||||| | ||||| | | ||||| | ||||| || ||||| Sbjct 631 CTCCTTCTGAATATTGTAATCACTTAATGTTCTCCCATCTTCCAACTGTTTCCCTGCAAA 690 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-G 34633 || | | ||||||||||| || | || || || || ||| ||||| ||||| Sbjct 691 GATAAGCCTTTGTTGGTCCGGTGGGATACCTTCTTTATC-CTGAATTTTTGCCTTAACAT 749 Query 34634 ATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | ||| |||||| || ||||||| ||||| || || || ||||| ||||| | Sbjct 750 TTTCAATAGTGTCTGAAGATTCTACTTCCAAAGTTATGGTCTTTCCAGTTAAAGTTTTGA 809 Query 34694 CAAAAATCTGCAT 34706 |||| |||||||| Sbjct 810 CAAAGATCTGCAT 822 >seq1656961 Length=2936 Score = 120 bits (132), Expect = 2e-22 Identities = 144/192 (75%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 34517 CCTTT-TGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| || ||||| ||||| || || |||||| | |||||||||||||| || || || Sbjct 2617 CCTTTCTGGATGTTGTAATCAGAGAGGGTTCGCCCATCTTCAAGTTGTTTTCCTGCGAAG 2676 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTG-TTTTAACGA 34634 ||||| | |||||||| || || | ||| ||||| ||| ||| ||| | ||||| Sbjct 2677 ATTAATCTTTGTTGGTCAGGAGGGATTCCTTCCTTATCT-TGAATTTTGGCTTTTACATT 2735 Query 34635 TAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | ||| || ||| ||| ||||| | || || |||||||| ||||||||||| || Sbjct 2736 TTCAATAGTATCTGAAGCCTCAACTTCAAGAGTAATGGTTTTACCAGTTAACGTTTTAAC 2795 Query 34695 AAAAATCTGCAT 34706 ||| |||||||| Sbjct 2796 AAAGATCTGCAT 2807 >seq1135619 Length=547 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | ||| || ||||| |||||| ||||||||| ||||| || || Sbjct 369 CCTCCTCTCAGCCTCAATACTAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCACTC 310 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | ||||||||||| || || ||||| || || | ||| ||||| || || Sbjct 309 AGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 250 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | ||| || || ||| ||| ||| | ||||| | |||||| ||| || || Sbjct 249 ATTCCTTCTTTATCTTGGAT-TTTAGCCTTAACATTTTCAATTGTATCTGAAGGTTCAAC 191 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || || || || ||||| ||||| ||||| || ||||| Sbjct 190 TTCAAGAGTGATGGTCTTTCCAGTTAAGGTTTTGACAAATATTTGCAT 143 >seq252373 Length=335 Score = 95.1 bits (104), Expect = 7e-15 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||| |||| | | || ||||| | ||| | ||| || ||||| || ||||| || Sbjct 29 CCACCTTTAAGTCTGAGTACTAAATGTAAAGTACACTCTTTCTGAATATTGTAATCGGAC 88 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||||||| | ||||| | ||||| || ||||| || || ||||||||||| || || Sbjct 89 AGTGTTCGCCCATCTTCCAACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGA 148 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTG-TTTTAACGATAAAATTGTGTC-TTCGCTCTCCA 34657 | ||| || || ||| ||| ||| | |||| | ||| || || | || ||| | Sbjct 149 ATTCCTTCTTTATCT-TGAATTTTAGCCTTTACATTTTCAATGGTATCACTTGC-CTCAA 206 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | ||||| || || || || || || || || ||||| |||||| Sbjct 207 CCTCTAGAGTTATAGTCTTCCCAGTCAAAGTCTTAACGAAAATTTGCATG 256 >seq770237 Length=425 Score = 91.5 bits (100), Expect = 9e-14 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | |||||| ||||| |||||| || ||||| || || || || Sbjct 280 CCCCCTCTCAACCTCAACACTAAATGCAGAGTGGATTCTTTTTGGATATTGTAGTCACTG 221 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || ||| | || ||||| ||||| || ||||| || || | || ||||| || || Sbjct 220 AGAGTACGCCCATCCTCAAGCTGTTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGTGGG 161 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || || || ||| |||||| || | | |||||| ||| ||| ||| Sbjct 160 ATACCTTCTTTATCTTGAATCTTTGCCTTGACATTTTCAATTGTATCTGAAGGCTCAACT 101 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || | ||||| || || || || || ||||||||||| |||||||| || Sbjct 100 TCTAGTGTTATGGTCTTCCCAGTCAAAGTTTTCACAAAGATCTGCATTTT 51 >seq663341 Length=403 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 || |||||||| ||| || || || || ||||| || ||| || || | |||||| Sbjct 387 ACTAAATGGAGTGTGGATTCTTTCTGGATATTATAGTCACTAAGAGTACGACCATCTTCA 328 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| || || ||||| ||||| | ||| ||||| || || | ||||| || ||| | Sbjct 327 AGTTGCTTTCCAGCAAAAATTAATCTCTGCTGGTCTGGTGGAATACCCTCTTTATCTTGG 268 Query 34618 ATCTTTTGTTTTAACGATAAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 || ||| ||||| | || ||||| ||| || || || | ||| || ||||| Sbjct 267 ATTTTTGCTTTTACATTTTCGATAGTGTCAGATGCT-TCAACCTCTAGGGTAATAGTTTT 209 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || | ||||||||||| || |||||| Sbjct 208 CCCCGTAAGAGTTTTCACAAAGATTTGCATG 178 >seq1605470 Length=1495 Score = 87.8 bits (96), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | ||| || ||||| |||||| ||||||||| ||||| || || Sbjct 154 CCTCCTCTCAGCCTCAATACTAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCACTC 95 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | ||||||||||| || || ||||| || || | ||| ||||| || || Sbjct 94 AGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 35 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC 34632 | ||| || || ||| ||| ||| | ||||| Sbjct 34 ATTCCTTCTTTATCTTGGAT-TTTAGCCTTAAC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 308348586792548