Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1488354 123 2e-23 seq678478 123 2e-23 seq770237 114 1e-20 seq252373 113 4e-20 seq1135619 111 1e-19 seq1656961 107 2e-18 seq663341 93.3 4e-14 seq1621446 86.0 5e-12 >seq1488354 Length=939 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||||| || || || |||||||| | ||||| ||||| || Sbjct 366 ATGCAAATTTTTGTGAAAACTCTAACTGGTAAAACTATTACTTTGGAAGTAGAACCTTCT 307 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | |||||| ||||||||| || ||||| || || ||||| || ||| Sbjct 306 GACACCATAGAAAATGTCAAAGCAAAAATTCAGGATAAAGAGGGTATTCCACCAGACCAA 247 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | |||| || || |||||||||||||| | || | || ||||| Sbjct 246 CAAAGGCTTATATTTGCTGGAAAACAATTGGAAGATGGAAGAACATTGAGTGACTACAAT 187 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 |||||||| || || ||| | ||||| || ||| Sbjct 186 ATTCAAAAAGAATCTACCCTTCATTTAGTGTTG 154 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || | || || || |||| || | ||||| || || || Sbjct 594 ATGCAAATTTTTGTGAAGACCTTAACGGGAAAAACTATCACCTTGGAAGTAGAGCCTTCA 535 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| ||||||||| || ||||| || || ||||| || ||| Sbjct 534 GACACAATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAGGGTATTCCACCAGACCAA 475 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | ||||| | || || |||||| | ||||| | || || ||||| || Sbjct 474 CAGAGATTAATTTTTGCTGGAAAACAACTAGAAGATGGCAGAACGCTTAGTGATTATAAT 415 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||| || || |||||| | || | ||||| | ||||| || Sbjct 414 ATTCAAAAGGAATCCACATTACATCTTGTGCTTCGTTTAAGAGGTGGAAT 365 >seq678478 Length=406 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26990 GCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGA 27049 ||| || || || ||||| || || || || | || || || ||||| ||| | || || Sbjct 1 GCAAATTTTCGTCAAAACCCTTACAGGAAAAACAATCACCCTCGAAGTTGAAGCTTCAGA 60 Query 27050 CTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACA 27109 | | ||||||| || ||| ||||| ||||||||||||||||| |||||||||||||| Sbjct 61 CACAATTGAGAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCACCCGATCAACA 120 Query 27110 GCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACAT 27169 | | || || | || || || ||| | ||||| || || | || |||||||| Sbjct 121 GAGATTGATTTTTGCTGGAAAGCAACTAGAAGATGGTCGTACATTGAGTGACTACAACAT 180 Query 27170 TCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| || | ||||| ||| |||| ||| | || || || Sbjct 181 CCAAAAAGAGTCCACACTCCATTTAGTTCTGCGGTTGAGAGGAGGTAT 228 >seq770237 Length=425 Score = 114 bits (126), Expect = 1e-20 Identities = 104/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||| |||| || ||| | || || |||||||| ||| | || Sbjct 282 ATGCAAATCTTTGTGAAAACTTTGACTGGTAAGACCATCACCCTTGAAGTTGAAGCATCA 341 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||||| || || ||||| ||||||||||||||||| ||||||||||| Sbjct 342 GACACGATTGAGAATGTTAAGGCTAAAATCCAAGACAAAGAAGGCATTCCACCCGATCAG 401 Query 27108 CAGCGTTTAAT 27118 ||| | ||||| Sbjct 402 CAGAGATTAAT 412 >seq252373 Length=335 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || ||| |||| || ||| |||| ||||| || || || | Sbjct 256 CATGCAAATTTTCGTTAAGACTTTGACTGGGAAGACTATAACTCTAGAGGTTGAGGCAAG 197 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | || || ||||||||||| |||||||| || || || || || Sbjct 196 TGATACCATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGAATTCCCCCTGACCA 137 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| || || | || |||||||| |||||||| | || | ||||||||||| Sbjct 136 ACAGCGATTGATCTTTGCTGGCAAACAGTTGGAAGATGGGCGAACACTGTCCGATTACAA 77 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGT 27196 ||||| || |||| || |||||||| || Sbjct 76 TATTCAGAAAGAGTGTACTTTACATTTAGT 47 >seq1135619 Length=547 Score = 111 bits (122), Expect = 1e-19 Identities = 175/250 (70%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| ||||| | || || ||| | || ||||||||||| ||||| || Sbjct 143 ATGCAAATATTTGTCAAAACCTTAACTGGAAAGACCATCACTCTTGAAGTTGAACCTTCA 202 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || ||||| ||||| |||||||| || ||||| || || Sbjct 203 GATACAATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGAATCCCACCAGACCAG 262 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || ||| | ||||| || || | || |||||| Sbjct 263 CAGAGATTGATTTTTGCTGGAAAGCAACTTGAAGATGGTCGCACACTGAGTGACTACAAC 322 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA--TAACAAACA 27225 || ||||||||||| || | ||||| || ||| | || | || || | ||| || | Sbjct 323 ATCCAAAAGGAGTCCACTCTTCATTTAGTATTGAGGCTGAGAGGAGGAAATTAATGAATA 382 Query 27226 CTTTTGTAAT 27235 |||| |||| Sbjct 383 TTTTTTTAAT 392 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 27074 AATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACA 27133 ||| ||||||||||||||||| ||||||||||| ||| | || || | || || || || Sbjct 1 AATCCAAGACAAAGAAGGCATTCCACCCGATCAGCAGAGATTGATTTTTGCTGGAAAGCA 60 Query 27134 ATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTT 27193 | | ||||| || || || |||||||||||| |||||||| || || | || || Sbjct 61 ACTTGAAGATGGTCGCACACTTAGCGATTACAACATCCAAAAGGAATCTACGCTCCACTT 120 Query 27194 GGT 27196 ||| Sbjct 121 GGT 123 >seq1656961 Length=2936 Score = 107 bits (118), Expect = 2e-18 Identities = 139/191 (73%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| | || || || | |||||||||||||| || | || Sbjct 2807 ATGCAGATCTTTGTTAAAACGTTAACTGGTAAAACCATTACTCTTGAAGTTGAGGCTTCA 2748 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||||||||| || ||||| || || || || ||| Sbjct 2747 GATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAA 2688 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | ||| || |||||| | ||||| | ||| | || ||||||||| Sbjct 2687 CAAAGATTAATCTTCGCAGGAAAACAACTTGAAGATGGGCGAACCCTCTCTGATTACAAC 2628 Query 27168 ATTCA-AAAGG 27177 || || ||||| Sbjct 2627 ATCCAGAAAGG 2617 >seq663341 Length=403 Score = 93.3 bits (102), Expect = 4e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 27039 GAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCA 27098 ||| | || ||| | || || | || ||| ||||| ||||||||||||||||| ||| Sbjct 2 GAAGCTTCAGACACTATCGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCA 61 Query 27099 CCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCC 27158 |||||||| ||| | ||||| | || || || ||| | ||||| || || | Sbjct 62 CCCGATCAGCAGAGATTAATTTTTGCTGGAAAGCAACTAGAAGATGGTCGTACATTGAGT 121 Query 27159 GATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| ||||| || || || | ||||| ||| |||| ||| | || ||||| Sbjct 122 GACTACAACATCCAAAAAGAATCCACACTCCATTTAGTTCTGCGGTTGAGAGGAGGCAT 180 >seq1621446 Length=1675 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 49819 TACGCACCCGGTAAAAGACATTGGTTGAAAATTAAAAAAGACTACTTGTGCGATGGCGCC 49878 |||| ||| || |||||||||||| |||| |||||||||||||||| || || || Sbjct 726 TACGAACCTGGGAAAAGACATTGGCTGAAGGTTAAAAAAGACTACTTACAAGACGGAGCT 667 Query 49879 ATGGCCGATAGCGTTGATTTGGTGGTTTTGGGTGCATGGTACGGTTCTGGAAAAAAGGGT 49938 ||||| ||| | || |||||||||| || || ||||| || |||| ||||| ||| Sbjct 666 ATGGCGGATTCTGCCGACCTGGTGGTTTTAGGGGCGTGGTATGGAACTGGGAAAAAAGGT 607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426103743421508