Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_028785.1 Length=72790 Score E Sequences producing significant alignments: (Bits) Value seq1298526 141 4e-29 seq209495 113 2e-20 seq188443 107 9e-19 >seq1298526 Length=653 Score = 141 bits (156), Expect = 4e-29 Identities = 271/397 (68%), Gaps = 2/397 (1%) Strand=Plus/Minus Query 64061 ATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGC 64120 ||| ||||||| ||| | | |||||| ||| ||||| || || || | || | ||| Sbjct 396 ATTTCCACCGGTTCTCTGGGGCTGGACATCGCGCTGGGTATTGGCGGCTTGCCCAAAGGC 337 Query 64121 CGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCG 64180 || | | ||||||||||| || ||||| || || || | || || || ||||| Sbjct 336 CGAATCATCGAAATCTACGGGCCTGAATCCTCGGGTAAAACCACACTCACGCTACACGCC 277 Query 64181 GTGGCC-AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCT 64239 || ||| ||||| ||||| | || |||| ||| || | | || || |||||| | || Sbjct 276 GTTGCCGAATGC-CAGAAAACTGGCGGCACCGCAGCATTTGTTGATGCCGAGCACGCGCT 218 Query 64240 GGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCC 64299 ||| || | || || || || || ||||| || || | || | || |||||| Sbjct 217 GGATCCCGTCTATGCGAAAAAACTTGGCGTGGATGTCAACGAGCTTCTCGTTTCTCAGCC 158 Query 64300 GGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTC 64359 || | |||||| || || ||||| ||| ||| | ||||| ||||||| | || Sbjct 157 CGATAATGGCGAACAAGCGCTGGAAATCACCGACATGCTCGTGCGCTCTGGCGCGGTGGA 98 Query 64360 CATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACAT 64419 ||||| ||||||||||| ||||| || || || ||||| || |||||||||| || Sbjct 97 TATCGTTGTCGTTGACTCCGTGGCTGCGCTCACCCCCCGCGCTGAAATCGAAGGCGATAT 38 Query 64420 CGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATG 64456 || ||| ||| | ||| | || || || || ||| Sbjct 37 GGGCGACTCGCACATGGGCTTACAAGCACGGCTAATG 1 >seq209495 Length=329 Score = 113 bits (124), Expect = 2e-20 Identities = 216/316 (68%), Gaps = 2/316 (1%) Strand=Plus/Minus Query 64061 ATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGC 64120 ||| ||||||| ||| | | |||||| ||| ||||| || || || | || | ||| Sbjct 315 ATTTCCACCGGTTCTCTGGGGCTGGACATCGCGCTGGGTATTGGCGGCTTGCCCAAAGGC 256 Query 64121 CGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCG 64180 || | | ||||||||||| || ||||| || || || | || || || ||||| Sbjct 255 CGAATCATCGAAATCTACGGGCCTGAATCCTCGGGTAAAACCACACTCACGCTACACGCC 196 Query 64181 GTGGCC-AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCT 64239 || ||| ||||| ||||| | || |||| ||| || | | || || |||||| | || Sbjct 195 GTTGCCGAATGC-CAGAAAACTGGCGGCACCGCAGCGTTTGTTGATGCCGAGCACGCGCT 137 Query 64240 GGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCC 64299 ||| || | || || || ||||| ||||| || || | || | || |||||| Sbjct 136 GGATCCCGTCTATGCGAAAAAACTCGGCGTGGATGTCAACGAACTTCTCGTTTCTCAGCC 77 Query 64300 GGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTC 64359 || | |||||| || || ||||| ||| ||| | ||||| ||||||| | || Sbjct 76 CGATAATGGCGAACAAGCGCTGGAAATCACCGACATGCTCGTTCGCTCTGGCGCGGTGGA 17 Query 64360 CATCGTCGTCGTTGAC 64375 ||||| ||||||||| Sbjct 16 TATCGTTGTCGTTGAC 1 >seq188443 Length=326 Score = 107 bits (118), Expect = 9e-19 Identities = 206/303 (68%), Gaps = 3/303 (1%) Strand=Plus/Minus Query 64518 TCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGG 64577 |||||||| | ||| ||||||||| ||| | ||| || || |||||||| | Sbjct 325 TCAACCAGATCCGCATGAAGATCGGG---GTGATGTTCGGTTCGCCGGAAACCACCACCG 269 Query 64578 GCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCG 64637 | || || || ||| ||||||| |||| || || ||||| | || ||||||| | | | Sbjct 268 GTGGTAACGCGCTGAAGTTCTACTCCTCCGTGCGGCTGGATATTCGCCGCATCGGCGCGG 209 Query 64638 AGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGC 64697 ||| | |||| |||| | || || |||||||| ||| |||||||||||||| Sbjct 208 TCAAGAAGGGCGCCGAGGTGATTGGGAATGAAACCCGGGTCAAGATCGTCAAGAACAAGA 149 Query 64698 TGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTG 64757 |||| |||||| | | ||||||||| | | ||||| ||||| || || | Sbjct 148 TGGCGCCGCCGTTCAAGCAGGCCGAGTTCGAAATTCTCTACGGTGAGGGGATTTCCTGGC 89 Query 64758 AGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGT 64817 || || || | || |||| |||| ||| ||||| |||| || ||| |||||| Sbjct 88 TGGGTGAGCTGATTGATCTGGGCGTGCAGCACAATCTGGTCGAGAAATCCGGCTCCTGGT 29 Query 64818 TCA 64820 || Sbjct 28 ACA 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 228083210860316