Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq1160712 123 8e-24 >seq1160712 Length=560 Score = 123 bits (136), Expect = 8e-24 Identities = 229/331 (69%), Gaps = 9/331 (3%) Strand=Plus/Minus Query 38982 GCGCGCCTTGATCCGTCCGTACGTCGCGATCTGTGCGACCTTGTCACTGCCGTACTTCTC 39041 ||| ||| | || | |||| ||| ||||| |||| ||| || | ||||| || || Sbjct 410 GCGTGCCATCATGCTGCCGTGCGTAGCGATTTGTGAGACTCGGTGCTTACCGTATTTTTC 351 Query 39042 GGTGACGTACCGGATCACGTCGCCACGGCGACGGTCATC--GAAGTCGATGTCCACGTCG 39099 || || || ||||| ||||| | || || ||| ||| ||||| || | ||| Sbjct 350 GGCCACATAGCGGATGACGTCATCGCGCTGATC--CATGCAGAAATCGATATCAAAATCG 293 Query 39100 GGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGG 39159 ||||| |||||||||||||| |||||||| ||||| || | | | | ||| | ||| Sbjct 292 GGCATAGAGACACGCTCAGGATTCAGGAATCGCTCAAACAGCAAATCATAAGGCAGCGGG 233 Query 39160 TCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCA 39219 || |||| |||||| || || | || |||||||||| ||| | || || || ||| Sbjct 232 TCGAGGTTGGTGATTTTCAGCGCAAAGGCCACCAGCGAGCCTGCCCCCGACCCCCGGCCA 173 Query 39220 GGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAG 39279 ||||| || | | | || ||||||||| ||| ||||| || |||| || ||| Sbjct 172 GGGCCCACGGGGATGTTTTGCTTCTTCGCCCATTGGATAAAGTCCGCAACGATCAGAAAG 113 Query 39280 TACGACGGG-AACCCCATCTGGTTGATCATG 39309 || | |||| || ||||| |||||| ||| Sbjct 112 TA-GCCGGGAAAACCCAT---GTTGATAATG 86 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156560069746392