Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq1643672 86.0 5e-12 >seq1643672 Length=2139 Score = 86.0 bits (94), Expect = 5e-12 Identities = 161/234 (69%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 118824 ATATTCTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCCCCAGATCTCC-----C 118878 |||| ||| |||||| |||||| ||||| ||||| ||||| |||| |||||| | Sbjct 741 ATATGATGCTCCAAAATGTCTCCACTGAAACCCATATACAGGACCCAAATCTCCTTCCTC 682 Query 118879 TGGGACC-TAAAATCTAAACCTACTTTTCTCTGAAATTCTTTTGACCCATTAGCATTCCA 118937 | | | ||||| |||||| | || |||||||| | || || || ||| Sbjct 681 TCTGTCTGTAAAACCTAAAC-----TATCAA-GAAATTCTCTGGAAGAGTTTTGATCCCA 628 Query 118938 AATAGCAACTCCtttttttGCCAGATCATTAGAGTTTGTAGAACCACTTAAAAACCAAAG 118997 ||| ||||||||| | || || || | ||||| || || || | |||||| || Sbjct 627 TATATGAACTCCTTTCTCACTTAGTTCTTTGGCATTTGTTGATCCCCTAATAAACCATAG 568 Query 118998 AAGCTCCTCAACAACGCCTCTCCAAAAAACTGTTTTTGTTGTAAACAGTGGAAA 119051 | ||| |||| || ||||||||||| ||| | || ||||||| | |||||| Sbjct 567 TAACTCTTCAAACACTCCTCTCCAAAACACTCTCTTGGTTGTAAGTAATGGAAA 514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406073453333584