Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1488354 123 6e-23 seq1656961 122 2e-22 seq252373 122 2e-22 seq1135619 114 3e-20 seq678478 111 4e-19 seq770237 105 2e-17 seq663341 84.2 5e-11 >seq1488354 Length=939 Score = 123 bits (136), Expect = 6e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||||| || || |||||||| || || || || | ||| | || |||||||||||| || Sbjct 164 TGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTCAATGTTC-TTCCATCTTCCAATTG 222 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || || || ||||| | ||||||||| || |||| || || || ||||| || || Sbjct 223 TTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGGAATACCCTCTTTATCCTGAATTTT 282 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 | ||| || ||||| ||||||||||| ||| || || | ||| || || || || || Sbjct 283 TGCTTTGACATTTTCTATGGTGTCAGAAGGTTCTACTTCCAAAGTAATAGTTTTACCAGT 342 Query 211091 GAGAGTCTTTACAAACACCTGCATT 211115 ||||| || ||||| | |||||| Sbjct 343 TAGAGTTTTCACAAAAATTTGCATT 367 >seq1656961 Length=2936 Score = 122 bits (134), Expect = 2e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984 |||| |||||||| ||||| | ||||| | |||||||| || || || |||||||||| Sbjct 2618 CTTTCTGGATGTTGTAATCAGAGAGGGTTCGCCCATCTTCAAGTTGTTTTCCTGCGAAGA 2677 Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTT 211044 | | | ||||||||||||||| | ||||||||| || || || || ||| || |||| Sbjct 2678 TTAATCTTTGTTGGTCAGGAGGGATTCCTTCCTTATCTTGAATTTTGGCTTTTACATTTT 2737 Query 211045 CGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 | || || || || ||||| || ||||| || || || || || | || || |||| Sbjct 2738 CAATAGTATCTGAAGCCTCAACTTCAAGAGTAATGGTTTTACCAGTTAACGTTTTAACAA 2797 Query 211105 ACACCTGCAT 211114 | | |||||| Sbjct 2798 AGATCTGCAT 2807 >seq252373 Length=335 Score = 122 bits (134), Expect = 2e-22 Identities = 161/222 (73%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 |||||| || || | || | ||| ||||||| || || || ||||| | || || | Sbjct 37 AAGTCTGAGTACTAAATGTAAAGTACACTCTTTCTGAATATTGTAATCGGACAGTGTTCG 96 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||||||| ||| ||||| || ||||| | || ||||||||||| |||| |||||| Sbjct 97 CCCATCTTCCAACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATTCCTTC 156 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAG 211072 || || || || || || || ||||| ||||| ||| ||| |||||||| || Sbjct 157 TTTATCTTGAATTTTAGCCTTTACATTTTCAATGGTATCA---CTTGCCTCAACCTCTAG 213 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || ||||| || || | |||||| || || | ||||| Sbjct 214 AGTTATAGTCTTCCCAGTCAAAGTCTTAACGAAAATTTGCAT 255 >seq1135619 Length=547 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 |||||||||||||| ||||||||||| || || || || | |||||||| || ||| Sbjct 345 TGAAGAGTGGACTCCTTTTGGATGTTGTAGTCACTCAGTGTGCGACCATCTTCAAGTTGC 286 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || || || | | || ||||| || || | |||||| || || ||||| || Sbjct 285 TTTCCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATTCCTTCTTTATCTTGGATTTTA 226 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || || ||||| || || || || |||||| || |||||||| |||||||| || Sbjct 225 GCCTTAACATTTTCAATTGTATCTGAAGGTTCAACTTCAAGAGTGATGGTCTTTCCAGTT 166 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | || || ||||| | ||||| Sbjct 165 AAGGTTTTGACAAATATTTGCAT 143 >seq678478 Length=406 Score = 111 bits (122), Expect = 4e-19 Identities = 143/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTG 210970 || || |||||||||||||||||||| || || | ||| || | |||||||| || || Sbjct 201 TGGAGTGTGGACTCTTTTTGGATGTTGTAGTCACTCAA-TGTACGACCATCTTCTAGTTG 143 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || || || | | ||||| || || |||| ||||| ||||| ||||| || Sbjct 142 CTTTCCAGCAAAAATCAATCTCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATTTT 83 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| || || || || ||||| || |||||| ||||| ||||| || ||||| || Sbjct 82 AGCTTTTACATTCTCAATTGTGTCTGAAGCTTCAACTTCGAGGGTGATTGTTTTTCCTGT 23 Query 211091 GAGAGTCTTTACAAA 211105 || || || || || Sbjct 22 AAGGGTTTTGACGAA 8 >seq770237 Length=425 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || |||||||| ||||||||||| || || || || || | ||||| || ||||| Sbjct 256 TGCAGAGTGGATTCTTTTTGGATATTGTAGTCACTGAGAGTACGCCCATCCTCAAGCTGT 197 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || ||||| || || | | ||| ||||| || || | ||||| || || || |||||| Sbjct 196 TTTCCTGCAAAAATCAACCTTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGAATCTTT 137 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || || ||||| || || || || ||||| || || || || ||||| || || Sbjct 136 GCCTTGACATTTTCAATTGTATCTGAAGGCTCAACTTCTAGTGTTATGGTCTTCCCAGTC 77 Query 211092 AGAGTCTTTACAAACACCTGCATTTT 211117 | ||| || ||||| | ||||||||| Sbjct 76 AAAGTTTTCACAAAGATCTGCATTTT 51 >seq663341 Length=403 Score = 84.2 bits (92), Expect = 5e-11 Identities = 112/152 (74%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTG 210970 || || ||||| |||||||||||||| || || | ||| || | |||||||| || || Sbjct 153 TGGAGTGTGGATTCTTTTTGGATGTTGTAGTCACTCAA-TGTACGACCATCTTCTAGTTG 95 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || || || | | || || || || |||| ||||| ||||| ||||| || Sbjct 94 CTTTCCAGCAAAAATTAATCTCTGCTGATCGGGTGGAATGCCTTCTTTGTCTTGGATTTT 35 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAG-AGCTT 211061 ||| || |||||||| ||||| | ||||| Sbjct 34 AGCTTTTACATTTTCGATAGTGTCTGAAGCTT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1134445473485940