Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1488354 89.7 4e-13 >seq1488354 Length=939 Score = 89.7 bits (98), Expect = 4e-13 Identities = 169/245 (69%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 39041 ACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTT 39100 || ||||||| || || |||||||| || | ||| | ||||| ||| || |||| Sbjct 353 ACAAAAATTTG--CATTCCACCTCTTAAACGAAGCACAAGATGTAATGTGGATTCCTTTT 410 Query 39101 GTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGAC 39160 | ||||||||||| ||| |||| | || || || ||||| || ||||| || | | Sbjct 411 GAATATTATAATCACTAAGCGTTCTGCCATCTTCTAGTTGTTTTCCAGCAAAAATTAATC 470 Query 39161 GCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCGTCGCCACC 39219 ||| ||||| | || | | |||||| ||| ||| ||| || ||| | | | | Sbjct 471 TCTGTTGGTCTGGTGGAATACCCTCTTTATCC-TGAATTTTTGCTTTCACATTTTCAATT 529 Query 39220 GTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATT 39279 || || | ||| || |||| |||||| |||||||||| | || || ||||| ||| Sbjct 530 GTGTCTGAAGGCTCTACTTCCAAGGTGATAGTTTTTCCCGTTAAGGTCTTCACAAAAATT 589 Query 39280 TGCAT 39284 ||||| Sbjct 590 TGCAT 594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420836739610628