Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq1488354 118 9e-22 seq242576 84.2 2e-11 >seq1488354 Length=939 Score = 118 bits (130), Expect = 9e-22 Identities = 158/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 101024 CTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAA 101083 || ||||| | || | || |||||||||||||||||||| || || ||| | | Sbjct 152 CTCAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTCAATGTTCTTCCA 211 Query 101084 TCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTG 101143 |||||||||||||| || ||| |||||||||||||||||||| || | || ||||| Sbjct 212 TCTTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGGAATACCCTCTTTA 271 Query 101144 TCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGT--TTCGACGGTAA 101201 || ||||||| ||| |||| | | || || | | ||| | ||| | |||| Sbjct 272 TCCTGAATTTTTGCTTTGACATTTTCTATGGTGTC--AGAAGGTTCTACTTCCAAAGTAA 329 Query 101202 TAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 ||||||| || || | ||||| | ||||||||||||| Sbjct 330 TAGTTTTACCAGTTAGAGTTTTCACAAAAATTTGCATT 367 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGT 101095 || || || ||||| ||||||||||| ||||| | ||| || |||||| | |||| Sbjct 392 TGTAATGTGGATTCCTTTTGAATATTATAATCACTAAGCGTTCTGCCATCTTCTAGTTGT 451 Query 101096 TTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155 || || ||| | || | || ||||||||| || | || ||||| || ||||||| Sbjct 452 TTTCCAGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCCTCTTTATCCTGAATTTTT 511 Query 101156 TGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTC 101215 |||||||| | | || |||| | | | ||| | ||| |||||||| ||||| Sbjct 512 GCTTTCACATTTTCAATTGTGTCTGAAGGCTCTACTTCCAAGGTGATAGTTTTTCCCGTT 571 Query 101216 AATGTTTTAATAAAAATTTGCATT 101239 || || || | ||||||||||||| Sbjct 572 AAGGTCTTCACAAAAATTTGCATT 595 >seq242576 Length=334 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 101042 GTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCCC 101101 || ||||||||||| ||||| |||||| || ||| | |||||| | |||||| || Sbjct 215 GTGGATTCTTTTTGTATATTATAATCGCTCAATGTTCTACCATCTTCAAGTTGTTTACCA 274 Query 101102 GCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155 ||| |||||||||||||||| ||| || | |||||||| || ||||||| Sbjct 275 GCAAATATAAGCCTTTGTTGATCTGGTGGGATACCTTCTTTATCCTGAATTTTT 328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401355095753004